Marine_Sequences
Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT
- Sequence_accession_number
- Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
- Species_name
- Species associated with the sequence, linking to the Marine Species table. Searchable
- GC_content
- GC content of the sequence
- Sequence_length
- Length of the sequence
- Sequence_status
- Status of the sequence (e.g., confirmed, predicted)
- Is_protein_coding_sequence
- Indicates if the sequence is protein-coding (1 for yes, 0 for no)
- Is_annotated
- Indicates if the sequence has been annotated (1 for yes, 0 for no)
5 rows where Species_name = "Vibrio tubiashii"
This data as json, CSV (advanced)
Species_name 1
- Vibrio tubiashii · 5 ✖
Sequence_status 1
- observed 5
Is_protein_coding_sequence 1
- 1 5
Is_annotated 1
- 1 5
Sequence_accession_number ▼ | Species_name | GC_content | Sequence_length | Sequence_status | Is_protein_coding_sequence | Is_annotated |
---|---|---|---|---|---|---|
LP124883 | Vibrio tubiashii | 50.9016393442623 | 3660.0 | observed | 1 | 1 |
LP126019 | Vibrio tubiashii | 53.3714285714286 | 2625.0 | observed | 1 | 1 |
LP127096 | Vibrio tubiashii | 43.938138635736 | 3621.0 | observed | 1 | 1 |
LP128392 | Vibrio tubiashii | 51.8137254901961 | 2040.0 | observed | 1 | 1 |
LP129281 | Vibrio tubiashii | 51.1437908496732 | 612.0 | observed | 1 | 1 |
Advanced export
JSON shape: default, array, newline-delimited, object
CREATE TABLE Marine_Sequences ( Sequence_accession_number TEXT PRIMARY KEY, Species_name TEXT, GC_content TEXT, Sequence_length TEXT, Sequence_status TEXT, Is_protein_coding_sequence INTEGER, Is_annotated INTEGER, FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name), FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number) );