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Marine_Sequences

Provides detailed information about each marine genetic sequence, including its GC content, sequence length, and whether it contains protein-coding information.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Sequence_accession_number
Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
Species_name
Species associated with the sequence, linking to the Marine Species table. Searchable
GC_content
GC content of the sequence
Sequence_length
Length of the sequence
Sequence_status
Status of the sequence (e.g., confirmed, predicted)
Is_protein_coding_sequence
Indicates if the sequence is protein-coding (1 for yes, 0 for no)
Is_annotated
Indicates if the sequence has been annotated (1 for yes, 0 for no)

242 rows where Species_name = "Vibrio vulnificus cmcp6"

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Is_annotated 2

  • 0 137
  • 1 105

Species_name 1

  • Vibrio vulnificus cmcp6 · 242 ✖

Sequence_status 1

  • observed 242

Is_protein_coding_sequence 1

  • 1 242
Sequence_accession_number ▼ Species_name GC_content Sequence_length Sequence_status Is_protein_coding_sequence Is_annotated
FB332515 Vibrio vulnificus cmcp6 44.6428571428571 1344.0 observed 1 0
FB333710 Vibrio vulnificus cmcp6 50.1930501930502 777.0 observed 1 0
FB334221 Vibrio vulnificus cmcp6 47.1556182416549 2127.0 observed 1 1
FB791815 Vibrio vulnificus cmcp6 45.0070323488045 711.0 observed 1 1
FB799959 Vibrio vulnificus cmcp6 45.0070323488045 711.0 observed 1 0
FB805268 Vibrio vulnificus cmcp6 51.9634703196347 1095.0 observed 1 1
FB807953 Vibrio vulnificus cmcp6 49.3991144845035 1581.0 observed 1 1
FB812765 Vibrio vulnificus cmcp6 45.0070323488045 711.0 observed 1 0
FB851432 Vibrio vulnificus cmcp6 45.0070323488045 711.0 observed 1 0
FB868111 Vibrio vulnificus cmcp6 45.0070323488045 711.0 observed 1 0
FB887201 Vibrio vulnificus cmcp6 45.0070323488045 711.0 observed 1 0
FB898801 Vibrio vulnificus cmcp6 47.4147414741474 909.0 observed 1 1
FB903268 Vibrio vulnificus cmcp6 47.4147414741474 909.0 observed 1 0
FB910949 Vibrio vulnificus cmcp6 47.4147414741474 909.0 observed 1 0
FB929032 Vibrio vulnificus cmcp6 47.4147414741474 909.0 observed 1 0
GM953147 Vibrio vulnificus cmcp6 46.3470319634703 438.0 observed 1 1
GM953995 Vibrio vulnificus cmcp6 47.7358490566038 1590.0 observed 1 1
GM954101 Vibrio vulnificus cmcp6 49.7991967871486 996.0 observed 1 1
GM954683 Vibrio vulnificus cmcp6 48.338081671415 1053.0 observed 1 0
GM954685 Vibrio vulnificus cmcp6 47.8632478632479 1053.0 observed 1 0
GM955075 Vibrio vulnificus cmcp6 44.0129449838188 309.0 observed 1 1
GM955379 Vibrio vulnificus cmcp6 45.3333333333333 525.0 observed 1 1
GM956200 Vibrio vulnificus cmcp6 46.8225419664269 1668.0 observed 1 1
GM956684 Vibrio vulnificus cmcp6 49.8168498168498 546.0 observed 1 1
GM957231 Vibrio vulnificus cmcp6 49.5 600.0 observed 1 1
GM957332 Vibrio vulnificus cmcp6 47.3177441540578 2181.0 observed 1 0
GM957980 Vibrio vulnificus cmcp6 49.8480243161094 987.0 observed 1 1
GM958481 Vibrio vulnificus cmcp6 52.5801952580195 717.0 observed 1 1
GM958585 Vibrio vulnificus cmcp6 53.4700315457413 1902.0 observed 1 1
GM958691 Vibrio vulnificus cmcp6 50.8230452674897 486.0 observed 1 1
GM959061 Vibrio vulnificus cmcp6 48.0 2250.0 observed 1 1
GM959252 Vibrio vulnificus cmcp6 47.3829201101928 1452.0 observed 1 1
GM960040 Vibrio vulnificus cmcp6 50.140056022409 1071.0 observed 1 0
GM960815 Vibrio vulnificus cmcp6 42.8355957767722 663.0 observed 1 1
GM960904 Vibrio vulnificus cmcp6 50.1930501930502 777.0 observed 1 0
GM961111 Vibrio vulnificus cmcp6 45.933014354067 1254.0 observed 1 1
GM961113 Vibrio vulnificus cmcp6 48.6786018755328 1173.0 observed 1 1
GM962177 Vibrio vulnificus cmcp6 46.8225419664269 1668.0 observed 1 0
GM962399 Vibrio vulnificus cmcp6 47.3177441540578 2181.0 observed 1 0
GM962633 Vibrio vulnificus cmcp6 47.3829201101928 1452.0 observed 1 0
GN095370 Vibrio vulnificus cmcp6 44.6759259259259 432.0 observed 1 1
GN095930 Vibrio vulnificus cmcp6 47.0364328439369 1839.0 observed 1 1
GN096370 Vibrio vulnificus cmcp6 47.7124183006536 1071.0 observed 1 0
GN096372 Vibrio vulnificus cmcp6 48.338081671415 1053.0 observed 1 0
GN096374 Vibrio vulnificus cmcp6 47.8632478632479 1053.0 observed 1 0
GN096376 Vibrio vulnificus cmcp6 50.140056022409 1071.0 observed 1 0
GN096808 Vibrio vulnificus cmcp6 48.3739837398374 246.0 observed 1 1
GN097786 Vibrio vulnificus cmcp6 47.7297895902547 903.0 observed 1 1
GN098709 Vibrio vulnificus cmcp6 46.0260972716489 843.0 observed 1 1
GN107767 Vibrio vulnificus cmcp6 51.4352665495021 1707.0 observed 1 1
GN108130 Vibrio vulnificus cmcp6 49.2345679012346 2025.0 observed 1 1
GN108132 Vibrio vulnificus cmcp6 50.611620795107 1962.0 observed 1 1
GN108134 Vibrio vulnificus cmcp6 49.7459349593496 1968.0 observed 1 1
GN109746 Vibrio vulnificus cmcp6 46.8599033816425 621.0 observed 1 1
GN111576 Vibrio vulnificus cmcp6 45.0520833333333 384.0 observed 1 1
GN117160 Vibrio vulnificus cmcp6 52.2131887985547 1107.0 observed 1 1
GN119554 Vibrio vulnificus cmcp6 46.3328941589811 2277.0 observed 1 1
GN120257 Vibrio vulnificus cmcp6 44.5736434108527 258.0 observed 1 0
GN120259 Vibrio vulnificus cmcp6 51.4492753623188 276.0 observed 1 1
GN120633 Vibrio vulnificus cmcp6 48.3060109289617 1830.0 observed 1 1
GN121782 Vibrio vulnificus cmcp6 49.5 1200.0 observed 1 0
GN122285 Vibrio vulnificus cmcp6 49.0147783251232 1218.0 observed 1 1
GN124410 Vibrio vulnificus cmcp6 48.3204134366925 387.0 observed 1 1
GN124854 Vibrio vulnificus cmcp6 51.0948905109489 822.0 observed 1 1
GN126842 Vibrio vulnificus cmcp6 51.3661202185792 2013.0 observed 1 0
GN127627 Vibrio vulnificus cmcp6 47.887323943662 639.0 observed 1 1
GN127735 Vibrio vulnificus cmcp6 46.8710089399745 783.0 observed 1 1
GN129483 Vibrio vulnificus cmcp6 49.0147783251232 1218.0 observed 1 0
HB443376 Vibrio vulnificus cmcp6 47.0364328439369 1839.0 observed 1 0
HB443378 Vibrio vulnificus cmcp6 52.1802325581395 2064.0 observed 1 1
HB661874 Vibrio vulnificus cmcp6 45.0070323488045 711.0 observed 1 0
HB670018 Vibrio vulnificus cmcp6 45.0070323488045 711.0 observed 1 0
HB675327 Vibrio vulnificus cmcp6 51.9634703196347 1095.0 observed 1 0
HB678012 Vibrio vulnificus cmcp6 49.3991144845035 1581.0 observed 1 0
HB682824 Vibrio vulnificus cmcp6 45.0070323488045 711.0 observed 1 0
HB721491 Vibrio vulnificus cmcp6 45.0070323488045 711.0 observed 1 0
HB738170 Vibrio vulnificus cmcp6 45.0070323488045 711.0 observed 1 0
HB757260 Vibrio vulnificus cmcp6 45.0070323488045 711.0 observed 1 0
HB768860 Vibrio vulnificus cmcp6 47.4147414741474 909.0 observed 1 0
HB773327 Vibrio vulnificus cmcp6 47.4147414741474 909.0 observed 1 0
HB781008 Vibrio vulnificus cmcp6 47.4147414741474 909.0 observed 1 0
HB799091 Vibrio vulnificus cmcp6 47.4147414741474 909.0 observed 1 0
HB823463 Vibrio vulnificus cmcp6 51.9634703196347 1095.0 observed 1 0
HB881527 Vibrio vulnificus cmcp6 47.153024911032 1686.0 observed 1 1
HB886521 Vibrio vulnificus cmcp6 50.2999143101971 1167.0 observed 1 1
HB900127 Vibrio vulnificus cmcp6 46.5599051008304 1686.0 observed 1 1
HB901816 Vibrio vulnificus cmcp6 47.0720720720721 1776.0 observed 1 1
HB901818 Vibrio vulnificus cmcp6 44.8888888888889 1800.0 observed 1 1
HB901820 Vibrio vulnificus cmcp6 49.3068113321278 1659.0 observed 1 1
HB901822 Vibrio vulnificus cmcp6 51.5048268029529 1761.0 observed 1 1
HB910380 Vibrio vulnificus cmcp6 49.6937882764654 1143.0 observed 1 1
HB911840 Vibrio vulnificus cmcp6 46.1279461279461 297.0 observed 1 1
HB912802 Vibrio vulnificus cmcp6 50.3582688449412 3489.0 observed 1 1
HB916173 Vibrio vulnificus cmcp6 50.3582688449412 3489.0 observed 1 0
HB917349 Vibrio vulnificus cmcp6 48.9414694894147 2409.0 observed 1 1
HB922229 Vibrio vulnificus cmcp6 49.5 1200.0 observed 1 0
HB922231 Vibrio vulnificus cmcp6 46.2121212121212 1188.0 observed 1 1
HB924518 Vibrio vulnificus cmcp6 48.9414694894147 2409.0 observed 1 0
HB926043 Vibrio vulnificus cmcp6 42.8355957767722 663.0 observed 1 0
HB927220 Vibrio vulnificus cmcp6 44.0129449838188 309.0 observed 1 0

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CREATE TABLE Marine_Sequences (
        Sequence_accession_number TEXT PRIMARY KEY,
        Species_name TEXT,
        GC_content TEXT,
        Sequence_length TEXT,
        Sequence_status TEXT,
        Is_protein_coding_sequence INTEGER,
        Is_annotated INTEGER,
        FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
        FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
    );
Powered by Datasette · Queries took 249.413ms · Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT