Marine_Sequences
Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT
- Sequence_accession_number
- Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
- Species_name
- Species associated with the sequence, linking to the Marine Species table. Searchable
- GC_content
- GC content of the sequence
- Sequence_length
- Length of the sequence
- Sequence_status
- Status of the sequence (e.g., confirmed, predicted)
- Is_protein_coding_sequence
- Indicates if the sequence is protein-coding (1 for yes, 0 for no)
- Is_annotated
- Indicates if the sequence has been annotated (1 for yes, 0 for no)
15 rows where Species_name = "Zostera marina"
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Suggested facets: GC_content, Sequence_length
Sequence_accession_number ▼ | Species_name | GC_content | Sequence_length | Sequence_status | Is_protein_coding_sequence | Is_annotated |
---|---|---|---|---|---|---|
AX338910 | Zostera marina | 39.5973154362416 | 1192.0 | observed | 0 | 0 |
AX338917 | Zostera marina | 39.202657807309 | 301.0 | observed | 0 | 0 |
AX338930 | Zostera marina | 49.4142705005325 | 939.0 | observed | 1 | 1 |
AX338936 | Zostera marina | 52.258064516129 | 1085.0 | observed | 1 | 0 |
AX338941 | Zostera marina | 52.5219298245614 | 912.0 | observed | 0 | 0 |
AX338946 | Zostera marina | 50.0 | 10.0 | observed | 0 | 0 |
DJ062541 | Zostera marina | 44.4559585492228 | 2895.0 | observed | 1 | 1 |
DM065212 | Zostera marina | 43.3060109289617 | 1464.0 | observed | 1 | 1 |
DM065217 | Zostera marina | 55.0 | 20.0 | observed | 0 | 0 |
DM065218 | Zostera marina | 42.8571428571428 | 21.0 | observed | 0 | 0 |
HB975110 | Zostera marina | 47.9076923076923 | 3250.0 | observed | 0 | 0 |
HD032520 | Zostera marina | 47.9076923076923 | 3250.0 | observed | 0 | 0 |
JA363889 | Zostera marina | 42.3268274014543 | 2613.0 | observed | 1 | 1 |
LQ450740 | Zostera marina | 42.3268274014543 | 2613.0 | observed | 1 | 0 |
LY998745 | Zostera marina | 46.6460268317853 | 969.0 | observed | 1 | 0 |
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CREATE TABLE Marine_Sequences ( Sequence_accession_number TEXT PRIMARY KEY, Species_name TEXT, GC_content TEXT, Sequence_length TEXT, Sequence_status TEXT, Is_protein_coding_sequence INTEGER, Is_annotated INTEGER, FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name), FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number) );