Marine_Sequences
Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT
- Sequence_accession_number
- Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
- Species_name
- Species associated with the sequence, linking to the Marine Species table. Searchable
- GC_content
- GC content of the sequence
- Sequence_length
- Length of the sequence
- Sequence_status
- Status of the sequence (e.g., confirmed, predicted)
- Is_protein_coding_sequence
- Indicates if the sequence is protein-coding (1 for yes, 0 for no)
- Is_annotated
- Indicates if the sequence has been annotated (1 for yes, 0 for no)
104,467 rows
This data as json, CSV (advanced)
Species_name >30
- Odobenus rosmarus divergens 35,189
- Trichechus manatus latirostris 11,899
- Physeter macrocephalus 7,451
- Ciona intestinalis 5,148
- Anguilla japonica 1,181
- Vibrio cholerae 1,141
- Prochlorococcus marinus 924
- Synechococcus sp. 911
- Vibrio vulnificus 792
- Vibrio parahaemolyticus 631
- Shewanella oneidensis 604
- Thermotoga maritima 593
- Anabaena sp. ybs01 588
- Oceanobacillus iheyensis 581
- Photobacterium profundum 533
- Ostreococcus tauri 526
- Photobacterium profundum ss9 524
- Saccharophagus degradans 2-40 523
- Pyrococcus furiosus 508
- Methanocaldococcus jannaschii 506
- Synechococcus elongatus 503
- Shewanella oneidensis mr-1 499
- Rhizophora mucronata 491
- Salmo salar 460
- Ruegeria pomeroyi dss-3 423
- Thraustochytrium sp. 411
- Vibrio parahaemolyticus rimd 2210633 404
- Thermococcus sp. 2319x1 400
- Oceanobacillus iheyensis hte831 387
- Vibrio vulnificus yj016 387
- …
| Sequence_accession_number ▼ | Species_name | GC_content | Sequence_length | Sequence_status | Is_protein_coding_sequence | Is_annotated |
|---|---|---|---|---|---|---|
| AR236598 | Physeter macrocephalus | 55.7058619493583 | 2883.0 | predicted | 1 | 1 |
| AR236600 | Physeter macrocephalus | 56.0984060984061 | 2886.0 | predicted | 1 | 1 |
| AR236602 | Odobenus rosmarus divergens | 57.9274611398964 | 2895.0 | predicted | 1 | 1 |
| AR236616 | Physeter macrocephalus | 55.7407407407407 | 2700.0 | predicted | 1 | 1 |
| AR236619 | Physeter macrocephalus | 55.3927095077039 | 2661.0 | predicted | 1 | 1 |
| AR237430 | Trichechus manatus latirostris | 55.0 | 1260.0 | predicted | 1 | 1 |
| AR238162 | Trichechus manatus latirostris | 59.7058823529412 | 340.0 | predicted | 1 | 1 |
| AR238367 | Physeter macrocephalus | 56.0371517027864 | 323.0 | predicted | 1 | 1 |
| AR241602 | Odobenus rosmarus divergens | 39.344262295082 | 244.0 | predicted | 1 | 1 |
| AR241625 | Infectious salmon anemia virus | 47.2177201512696 | 1851.0 | predicted | 1 | 1 |
| AR242393 | Psychrobacter maritimus | 49.5337995337995 | 858.0 | predicted | 1 | 1 |
| AR242998 | Trichechus manatus latirostris | 60.2510460251046 | 239.0 | predicted | 1 | 1 |
| AR243009 | Trichechus manatus latirostris | 63.5627530364373 | 247.0 | predicted | 1 | 1 |
| AR243532 | Odobenus rosmarus divergens | 52.4238227146814 | 1444.0 | predicted | 1 | 1 |
| AR243546 | Physeter macrocephalus | 52.9279279279279 | 444.0 | predicted | 1 | 1 |
| AR243548 | Physeter macrocephalus | 52.4305555555556 | 576.0 | predicted | 1 | 1 |
| AR243549 | Physeter macrocephalus | 51.8691588785047 | 642.0 | predicted | 1 | 1 |
| AR243725 | Trichechus manatus latirostris | 57.7937649880096 | 1251.0 | predicted | 1 | 1 |
| AR243726 | Trichechus manatus latirostris | 57.7138289368505 | 1251.0 | predicted | 1 | 1 |
| AR243754 | Odobenus rosmarus divergens | 44.9494949494949 | 792.0 | predicted | 1 | 1 |
| AR247241 | Rhizophora mucronata | 48.5401459854015 | 274.0 | predicted | 1 | 1 |
| AR248039 | Rhizophora mucronata | 45.1612903225806 | 279.0 | predicted | 1 | 1 |
| AR252016 | Odobenus rosmarus divergens | 45.7142857142857 | 315.0 | predicted | 1 | 1 |
| AR252728 | Trichechus manatus latirostris | 50.1344086021505 | 744.0 | predicted | 1 | 1 |
| AR253936 | Odobenus rosmarus divergens | 41.1602209944751 | 1086.0 | predicted | 1 | 1 |
| AR254055 | Trichechus manatus latirostris | 48.1037924151697 | 1002.0 | predicted | 1 | 1 |
| AR254581 | Odobenus rosmarus divergens | 43.6100131752306 | 759.0 | predicted | 1 | 1 |
| AR255735 | Odobenus rosmarus divergens | 51.4285714285714 | 210.0 | predicted | 1 | 1 |
| AR256347 | Rhizophora mucronata | 50.0 | 282.0 | predicted | 1 | 1 |
| AR256857 | Odobenus rosmarus divergens | 63.3802816901408 | 355.0 | predicted | 1 | 1 |
| AR257488 | Pseudooceanicola lipolyticus | 71.0691823899371 | 159.0 | predicted | 1 | 1 |
| AR258777 | Physeter macrocephalus | 38.6569872958258 | 1653.0 | predicted | 1 | 1 |
| AR263584 | Odobenus rosmarus divergens | 50.0 | 536.0 | predicted | 1 | 1 |
| AR264832 | Trichechus manatus latirostris | 54.8412698412698 | 1260.0 | predicted | 1 | 1 |
| AR268436 | Physeter macrocephalus | 53.0120481927711 | 249.0 | predicted | 1 | 1 |
| AR268437 | Physeter macrocephalus | 52.7777777777778 | 252.0 | predicted | 1 | 1 |
| AR268886 | Odobenus rosmarus divergens | 67.381974248927 | 699.0 | predicted | 1 | 1 |
| AR268928 | Odobenus rosmarus divergens | 65.3386454183267 | 251.0 | predicted | 1 | 1 |
| AR268931 | Odobenus rosmarus divergens | 64.9805447470817 | 257.0 | predicted | 1 | 1 |
| AR269253 | Odobenus rosmarus divergens | 58.5858585858586 | 1287.0 | predicted | 1 | 1 |
| AR269254 | Odobenus rosmarus divergens | 58.6973180076628 | 1305.0 | predicted | 1 | 1 |
| AR269562 | Odobenus rosmarus divergens | 45.9677419354839 | 248.0 | predicted | 1 | 1 |
| AR269591 | Physeter macrocephalus | 56.2841530054645 | 183.0 | predicted | 1 | 1 |
| AR269608 | Physeter macrocephalus | 63.75 | 240.0 | predicted | 1 | 1 |
| AR269661 | Odobenus rosmarus divergens | 55.609756097561 | 205.0 | predicted | 1 | 1 |
| AR269670 | Trichechus manatus latirostris | 59.2964824120603 | 199.0 | predicted | 1 | 1 |
| AR269672 | Odobenus rosmarus divergens | 49.7512437810945 | 201.0 | predicted | 1 | 1 |
| AR269836 | Odobenus rosmarus divergens | 63.1578947368421 | 266.0 | predicted | 1 | 1 |
| AR269844 | Trichechus manatus latirostris | 45.3531598513011 | 269.0 | predicted | 1 | 1 |
| AR269920 | Seriola lalandi dorsalis | 42.8571428571428 | 182.0 | predicted | 1 | 1 |
| AR270080 | Trichechus manatus latirostris | 54.1353383458647 | 266.0 | predicted | 1 | 1 |
| AR270354 | Trichechus manatus latirostris | 56.9565217391304 | 230.0 | predicted | 1 | 1 |
| AR270520 | Epinephelus coioides | 50.1602564102564 | 624.0 | predicted | 1 | 1 |
| AR270539 | Trichechus manatus latirostris | 52.956465237167 | 1539.0 | predicted | 1 | 1 |
| AR270573 | Odobenus rosmarus divergens | 46.7061923583663 | 1518.0 | predicted | 1 | 1 |
| AR270714 | Trichechus manatus latirostris | 45.6456456456457 | 999.0 | predicted | 1 | 1 |
| AR270929 | Physeter macrocephalus | 44.3243243243243 | 555.0 | predicted | 1 | 1 |
| AR270935 | Trichechus manatus latirostris | 61.0119047619048 | 1680.0 | predicted | 1 | 1 |
| AR271694 | Odobenus rosmarus divergens | 43.4782608695652 | 2208.0 | predicted | 1 | 1 |
| AR272196 | Physeter macrocephalus | 49.8924731182796 | 465.0 | predicted | 1 | 1 |
| AR272225 | Physeter macrocephalus | 49.0322580645161 | 465.0 | predicted | 1 | 1 |
| AR272226 | Physeter macrocephalus | 49.8924731182796 | 465.0 | predicted | 1 | 1 |
| AR272227 | Physeter macrocephalus | 49.8924731182796 | 465.0 | predicted | 1 | 1 |
| AR272228 | Physeter macrocephalus | 49.6774193548387 | 465.0 | predicted | 1 | 1 |
| AR272628 | Physeter macrocephalus | 56.0371517027864 | 323.0 | predicted | 1 | 1 |
| AR272744 | Odobenus rosmarus divergens | 43.1818181818182 | 264.0 | predicted | 1 | 1 |
| AR273102 | Odobenus rosmarus divergens | 49.7142857142857 | 175.0 | predicted | 1 | 1 |
| AR273159 | Trichechus manatus latirostris | 62.1160409556314 | 293.0 | predicted | 1 | 1 |
| AR273160 | Trichechus manatus latirostris | 52.1929824561403 | 228.0 | predicted | 1 | 1 |
| AR273182 | Physeter macrocephalus | 56.5 | 400.0 | predicted | 1 | 1 |
| AR273257 | Trichechus manatus latirostris | 44.0860215053763 | 186.0 | predicted | 1 | 1 |
| AR273363 | Physeter macrocephalus | 52.5 | 280.0 | predicted | 1 | 1 |
| AR273403 | Physeter macrocephalus | 55.5555555555556 | 324.0 | predicted | 1 | 1 |
| AR273485 | Odobenus rosmarus divergens | 43.7275985663082 | 279.0 | predicted | 1 | 1 |
| AR273498 | Physeter macrocephalus | 49.4845360824742 | 194.0 | predicted | 1 | 1 |
| AR273645 | Trichechus manatus latirostris | 56.9105691056911 | 369.0 | predicted | 1 | 1 |
| AR273683 | Odobenus rosmarus divergens | 43.1858407079646 | 565.0 | predicted | 1 | 1 |
| AR273810 | Odobenus rosmarus divergens | 47.7848101265823 | 316.0 | predicted | 1 | 1 |
| AR273966 | Odobenus rosmarus divergens | 54.4041450777202 | 193.0 | predicted | 1 | 1 |
| AR273992 | Physeter macrocephalus | 57.3770491803279 | 305.0 | predicted | 1 | 1 |
| AR274028 | Odobenus rosmarus divergens | 44.8630136986301 | 292.0 | predicted | 1 | 1 |
| AR277939 | Physeter macrocephalus | 56.4356435643564 | 1212.0 | predicted | 1 | 1 |
| AR279571 | Trichechus manatus latirostris | 49.3999510164095 | 4083.0 | predicted | 1 | 1 |
| AR280621 | Odobenus rosmarus divergens | 46.734693877551 | 490.0 | predicted | 1 | 1 |
| AR280726 | Odobenus rosmarus divergens | 53.8461538461538 | 221.0 | predicted | 1 | 1 |
| AR280806 | Physeter macrocephalus | 55.7651991614256 | 477.0 | predicted | 1 | 1 |
| AR281266 | Odobenus rosmarus divergens | 43.7269372693727 | 1626.0 | predicted | 1 | 1 |
| AR281271 | Odobenus rosmarus divergens | 45.5886781090033 | 3321.0 | predicted | 1 | 1 |
| AR281304 | Odobenus rosmarus divergens | 55.2016985138004 | 2826.0 | predicted | 1 | 1 |
| AR300936 | Odobenus rosmarus divergens | 55.46875 | 384.0 | predicted | 1 | 1 |
| AR300941 | Physeter macrocephalus | 63.0952380952381 | 756.0 | predicted | 1 | 1 |
| AR301415 | Acetabularia peniculus | 40.7894736842105 | 228.0 | predicted | 1 | 1 |
| AR302225 | Odobenus rosmarus divergens | 44.8075526506899 | 1377.0 | predicted | 1 | 1 |
| AR305525 | Odobenus rosmarus divergens | 52.6422764227642 | 492.0 | predicted | 1 | 1 |
| AR305530 | Odobenus rosmarus divergens | 54.6747967479675 | 492.0 | predicted | 1 | 1 |
| AR306270 | Trichechus manatus latirostris | 62.8395061728395 | 1620.0 | predicted | 1 | 1 |
| AR306286 | Odobenus rosmarus divergens | 55.0836550836551 | 777.0 | predicted | 1 | 1 |
| AR306287 | Odobenus rosmarus divergens | 55.2123552123552 | 777.0 | predicted | 1 | 1 |
| AR307661 | Trichechus manatus latirostris | 56.3762626262626 | 1584.0 | predicted | 1 | 1 |
| AR308589 | Odobenus rosmarus divergens | 36.1751152073733 | 1302.0 | predicted | 1 | 1 |
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CREATE TABLE Marine_Sequences (
Sequence_accession_number TEXT PRIMARY KEY,
Species_name TEXT,
GC_content TEXT,
Sequence_length TEXT,
Sequence_status TEXT,
Is_protein_coding_sequence INTEGER,
Is_annotated INTEGER,
FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
);