Marine_Sequences_Protein_Annotations
Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT
- Sequence_accession_number
- Unique identifier for the genetic sequence as specified in INSDC databases, linking to the Marine Sequences table (Primary Key). Searchable
- f_header
- Header of the most similar protein entry in the reference dataset
- sseqid
- Sequence ID of the similar protein entry
- stitle
- Title of the similar protein entry
- pident
- Percentage of identical matches
- evalue
- E-value of the alignment
- qcovs
- Query coverage of the alignment
- annotation_source
- Source of the annotation (sp for Swiss-Prot; tr for TrEMBL)
1 row where Sequence_accession_number = "CS360704"
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Sequence_accession_number ▼ | f_header | sseqid | stitle | pident | evalue | qcovs | annotation_source |
---|---|---|---|---|---|---|---|
CS360704 | 6940703_synthetic | tr|A0A2U3W0Y8|A0A2U3W0Y8_ODORO | tr|A0A2U3W0Y8|A0A2U3W0Y8_ODORO Short transient receptor potential channel 3 isoform X1 OS=Odobenus rosmarus divergens OX=9708 GN=TRPC3 PE=4 SV=1 | 98.6 | 0.0 | 99.9 | tr |
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CREATE TABLE Marine_Sequences_Protein_Annotations ( Sequence_accession_number TEXT PRIMARY KEY, f_header TEXT, sseqid TEXT, stitle TEXT, pident TEXT, evalue TEXT, qcovs TEXT, annotation_source TEXT, FOREIGN KEY (Sequence_accession_number) REFERENCES Marine_Sequences (Sequence_accession_number) );