Marine_Sequences_Protein_Annotations
Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT
- Sequence_accession_number
- Unique identifier for the genetic sequence as specified in INSDC databases, linking to the Marine Sequences table (Primary Key). Searchable
- f_header
- Header of the most similar protein entry in the reference dataset
- sseqid
- Sequence ID of the similar protein entry
- stitle
- Title of the similar protein entry
- pident
- Percentage of identical matches
- evalue
- E-value of the alignment
- qcovs
- Query coverage of the alignment
- annotation_source
- Source of the annotation (sp for Swiss-Prot; tr for TrEMBL)
1 row where Sequence_accession_number = "HC890631"
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Sequence_accession_number ▼ | f_header | sseqid | stitle | pident | evalue | qcovs | annotation_source |
---|---|---|---|---|---|---|---|
HC890631 | 51729370_pyrobaculum | sp|O93730|ACSA_PYRAE | sp|O93730|ACSA_PYRAE Acetyl-coenzyme A synthetase OS=Pyrobaculum aerophilum (strain ATCC 51768 / DSM 7523 / JCM 9630 / CIP 104966 / NBRC 100827 / IM2) OX=178306 GN=acsA PE=3 SV=2 | 100.0 | 0.0 | 99.9 | sp |
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CREATE TABLE Marine_Sequences_Protein_Annotations ( Sequence_accession_number TEXT PRIMARY KEY, f_header TEXT, sseqid TEXT, stitle TEXT, pident TEXT, evalue TEXT, qcovs TEXT, annotation_source TEXT, FOREIGN KEY (Sequence_accession_number) REFERENCES Marine_Sequences (Sequence_accession_number) );