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Marine_Species

Catalogs marine species associated with genetic sequences in the dataset. It includes the species name, taxonomic classification (domain, phylum), and information on whether the species is considered deep-sea.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Species_name
Name of the marine species (Primary Key). Searchable
Domain
Taxonomic domain of the species
Phylum
Taxonomic phylum of the species
Taxonomic_source
Source of the taxonomic classification
Is_deep_sea
Indicates if the species is a deep-sea species (1 for yes, 0 for no)
Deep_sea_source
Source of information on the species' deep-sea status
Is_ABNJ_present
Indicates if the species is present in ABNJ (YES, NO, UNKNOWN)

130 rows where Deep_sea_source = 0, Domain = "Bacteria" and Phylum = "Proteobacteria"

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Suggested facets: Taxonomic_source, is_ABNJ_present

Is_ABNJ_present 3

  • UNKNOWN 71
  • YES 46
  • NO 13

Phylum 1

  • Proteobacteria · 130 ✖

Is_deep_sea 1

  • 0 130

Domain 1

  • Bacteria · 130 ✖
Species_name ▼ Domain Phylum Taxonomic_source Is_deep_sea Deep_sea_source is_ABNJ_present
Aeromonas salmonicida Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Agarivorans albus Bacteria Proteobacteria WoRMS 0 0 YES
Alcanivorax borkumensis Bacteria Proteobacteria WoRMS 0 0 YES
Alcanivorax hongdengensis Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Alcanivorax jadensis Bacteria Proteobacteria WoRMS 0 0 YES
Aliivibrio fischeri Bacteria Proteobacteria WoRMS 0 0 YES
Aliivibrio salmonicida Bacteria Proteobacteria WoRMS 0 0 YES
Aliivibrio wodanis Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Aurantimonas manganoxydans Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Bermanella marisrubri Bacteria Proteobacteria WoRMS 0 0 YES
Candidatus endobugula sertula Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Candidatus pelagibacter Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Candidatus pelagibacter ubique Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Colwellia psychrerythraea Bacteria Proteobacteria WoRMS 0 0 YES
Congregibacter litoralis Bacteria Proteobacteria WoRMS 0 0 NO
Desulfobacula toluolica Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Desulfomicrobium baculatum Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Desulfomicrobium baculatum dsm 4028 Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Desulfospira joergensenii Bacteria Proteobacteria WoRMS 0 0 YES
Desulfotalea psychrophila Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Desulfotalea psychrophila lsv54 Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Dinoroseobacter shibae Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Erythrobacter litoralis Bacteria Proteobacteria WoRMS 0 0 YES
Ferrimonas balearica Bacteria Proteobacteria WoRMS 0 0 YES
Fulvimarina pelagi Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Glaciecola punicea Bacteria Proteobacteria WoRMS 0 0 NO
Hahella chejuensis Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Haliangium ochraceum Bacteria Proteobacteria WoRMS 0 0 YES
Halomonas aquamarina Bacteria Proteobacteria WoRMS 0 0 YES
Hippea maritima Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Hoeflea phototrophica Bacteria Proteobacteria WoRMS 0 0 NO
Hydrogenovibrio marinus Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Hyphomonas neptunium Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Kangiella koreensis Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Maricaulis maris Bacteria Proteobacteria WoRMS 0 0 YES
Marinobacter algicola Bacteria Proteobacteria WoRMS 0 0 YES
Marinomonas mediterranea Bacteria Proteobacteria WoRMS 0 0 YES
Marinomonas ushuaiensis Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Methylophaga aminisulfidivorans Bacteria Proteobacteria WoRMS 0 0 YES
Moritella japonica Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Moritella marina Bacteria Proteobacteria WoRMS 0 0 YES
Moritella viscosa Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Neptuniibacter caesariensis Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Nitrococcus mobilis Bacteria Proteobacteria WoRMS 0 0 YES
Nitrococcus mobilis nb-231 Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Nitrosococcus oceani Bacteria Proteobacteria WoRMS 0 0 YES
Oceanicaulis alexandrii Bacteria Proteobacteria WoRMS 0 0 YES
Oceanicola granulosus Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Octadecabacter antarcticus Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Octadecabacter antarcticus 307 Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Paracoccus zeaxanthinifaciens Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Parvibaculum lavamentivorans Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Parvularcula bermudensis Bacteria Proteobacteria WoRMS 0 0 NO
Photobacterium angustum Bacteria Proteobacteria WoRMS 0 0 YES
Photobacterium leiognathi Bacteria Proteobacteria WoRMS 0 0 YES
Piscirickettsia salmonis Bacteria Proteobacteria WoRMS 0 0 YES
Plesiocystis pacifica Bacteria Proteobacteria WoRMS 0 0 YES
Pseudoalteromonas atlantica Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Pseudoalteromonas carrageenovora Bacteria Proteobacteria WoRMS 0 0 NO
Pseudoalteromonas flavipulchra Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Pseudoalteromonas haloplanktis Bacteria Proteobacteria WoRMS 0 0 YES
Pseudoalteromonas luteoviolacea Bacteria Proteobacteria WoRMS 0 0 YES
Pseudoalteromonas marina Bacteria Proteobacteria WoRMS 0 0 YES
Pseudoalteromonas piscicida Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Pseudoalteromonas tunicata Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Pseudovibrio sp. fo-beg1 Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Psychromonas ingrahamii Bacteria Proteobacteria WoRMS 0 0 YES
Psychromonas ingrahamii 37 Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Reinekea sp. Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Rhodovulum sulfidophilum Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Roseobacter denitrificans Bacteria Proteobacteria WoRMS 0 0 NO
Roseovarius nubinhibens Bacteria Proteobacteria WoRMS 0 0 YES
Ruegeria pomeroyi Bacteria Proteobacteria WoRMS 0 0 YES
Saccharophagus degradans Bacteria Proteobacteria WoRMS 0 0 YES
Sagittula stellata Bacteria Proteobacteria WoRMS 0 0 YES
Shewanella algae Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Shewanella baltica Bacteria Proteobacteria WoRMS 0 0 NO
Shewanella colwelliana Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Shewanella denitrificans Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Shewanella hanedai Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Shewanella japonica Bacteria Proteobacteria WoRMS 0 0 YES
Shewanella loihica Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Shewanella marinintestina Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Shewanella massilia Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Shewanella olleyana Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Shewanella pneumatophori Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Shewanella putida Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Shewanella putrefaciens Bacteria Proteobacteria WoRMS 0 0 NO
Shewanella violacea Bacteria Proteobacteria WoRMS 0 0 YES
Shewanella woodyi Bacteria Proteobacteria WoRMS 0 0 NO
Shewanella xiamenensis Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Sphingopyxis alaskensis Bacteria Proteobacteria WoRMS 0 0 NO
Sulfitobacter donghicola Bacteria Proteobacteria WoRMS 0 0 NO
Teredinibacter Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Teredinibacter turnerae Bacteria Proteobacteria WoRMS 0 0 YES
Teredinibacter turnerae t7901 Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Thalassospira profundimaris Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Thiocapsa roseopersicina Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Uncultured marine alpha proteobacterium hot2c01 Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Uncultured marine gamma proteobacterium ebac20e09 Bacteria Proteobacteria NCBI 0 0 UNKNOWN

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CREATE TABLE Marine_Species (
        Species_name TEXT PRIMARY KEY,
        Domain TEXT,
        Phylum TEXT,
        Taxonomic_source TEXT,
        Is_deep_sea INTEGER,
        Deep_sea_source TEXT,
        is_ABNJ_present TEXT
    );
Powered by Datasette · Queries took 11.79ms · Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT