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Marine_Species

Catalogs marine species associated with genetic sequences in the dataset. It includes the species name, taxonomic classification (domain, phylum), and information on whether the species is considered deep-sea.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Species_name
Name of the marine species (Primary Key). Searchable
Domain
Taxonomic domain of the species
Phylum
Taxonomic phylum of the species
Taxonomic_source
Source of the taxonomic classification
Is_deep_sea
Indicates if the species is a deep-sea species (1 for yes, 0 for no)
Deep_sea_source
Source of information on the species' deep-sea status
Is_ABNJ_present
Indicates if the species is present in ABNJ (YES, NO, UNKNOWN)

38 rows where Deep_sea_source = 2018, Domain = "Bacteria" and Is_ABNJ_present = "UNKNOWN"

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Suggested facets: Taxonomic_source

Phylum 9

  • Pseudomonadota 18
  • Proteobacteria 8
  • Thermotogota 3
  • Bacillota 2
  • Campylobacterota 2
  • Firmicutes 2
  • Aquificae 1
  • Thermodesulfobacteria 1
  • Thermotogae 1

Is_deep_sea 1

  • 1 38

Is_ABNJ_present 1

  • UNKNOWN · 38 ✖

Domain 1

  • Bacteria · 38 ✖
Species_name ▼ Domain Phylum Taxonomic_source Is_deep_sea Deep_sea_source is_ABNJ_present
Alcanivorax pacificus Bacteria Pseudomonadota Wikipedia 1 2018 UNKNOWN
Alvinella pompejana epibiont 6c6 Bacteria Proteobacteria NCBI 1 2018 UNKNOWN
Aquifex pyrophilus Bacteria Aquificae WoRMS 1 2018 UNKNOWN
Caminibacter hydrogeniphilus Bacteria Proteobacteria WoRMS 1 2018 UNKNOWN
Caminibacter mediatlanticus Bacteria Proteobacteria WoRMS 1 2018 UNKNOWN
Caminibacter mediatlanticus tb-2 Bacteria Campylobacterota Wikipedia 1 2018 UNKNOWN
Gammaproteobacteria Bacteria Pseudomonadota Wikipedia 1 2018 UNKNOWN
Geobacillus kaustophilus Bacteria Firmicutes WoRMS 1 2018 UNKNOWN
Geobacillus kaustophilus hta426 Bacteria Bacillota Wikipedia 1 2018 UNKNOWN
Idiomarina loihiensis l2tr Bacteria Pseudomonadota Wikipedia 1 2018 UNKNOWN
Marinobacter manganoxydans mni7-9 Bacteria Proteobacteria NCBI 1 2018 UNKNOWN
Moritella profunda Bacteria Proteobacteria WoRMS 1 2018 UNKNOWN
Moritella sp. pe36 Bacteria Proteobacteria NCBI 1 2018 UNKNOWN
Nitratireductor indicus Bacteria Proteobacteria WoRMS 1 2018 UNKNOWN
Oceanobacillus iheyensis Bacteria Firmicutes WoRMS 1 2018 UNKNOWN
Oceanobacillus iheyensis hte831 Bacteria Bacillota Wikipedia 1 2018 UNKNOWN
Photobacterium profundum ss9 Bacteria Pseudomonadota Wikipedia 1 2018 UNKNOWN
Photobacterium sp. ska34 Bacteria Pseudomonadota Wikipedia 1 2018 UNKNOWN
Shewanella oneidensis Bacteria Pseudomonadota Wikipedia 1 2018 UNKNOWN
Shewanella oneidensis mr-1 Bacteria Pseudomonadota Wikipedia 1 2018 UNKNOWN
Shewanella oneidensis mtra Bacteria Pseudomonadota Wikipedia 1 2018 UNKNOWN
Shewanella oneidensis mtra-f Bacteria Pseudomonadota Wikipedia 1 2018 UNKNOWN
Shewanella oneidensis mtrabc Bacteria Pseudomonadota Wikipedia 1 2018 UNKNOWN
Shewanella oneidensis mtrb Bacteria Pseudomonadota Wikipedia 1 2018 UNKNOWN
Shewanella oneidensis mtrc Bacteria Pseudomonadota Wikipedia 1 2018 UNKNOWN
Shewanella oneidensis mtrd Bacteria Pseudomonadota Wikipedia 1 2018 UNKNOWN
Shewanella oneidensis mtrdef Bacteria Pseudomonadota Wikipedia 1 2018 UNKNOWN
Shewanella oneidensis mtre Bacteria Pseudomonadota Wikipedia 1 2018 UNKNOWN
Shewanella oneidensis mtrf Bacteria Pseudomonadota Wikipedia 1 2018 UNKNOWN
Shewanella oneidensis mtrfcab Bacteria Pseudomonadota Wikipedia 1 2018 UNKNOWN
Shewanella oneidensis omca Bacteria Pseudomonadota Wikipedia 1 2018 UNKNOWN
Sulfurimonas denitrificans Bacteria Proteobacteria WoRMS 1 2018 UNKNOWN
Sulfurovum sp. nbc37-1 Bacteria Campylobacterota Wikipedia 1 2018 UNKNOWN
Thermodesulfatator indicus Bacteria Thermodesulfobacteria WoRMS 1 2018 UNKNOWN
Thermosipho melanesiensis bi429 Bacteria Thermotogota Wikipedia 1 2018 UNKNOWN
Thermotoga maritima Bacteria Thermotogae WoRMS 1 2018 UNKNOWN
Thermotoga maritima msb8 Bacteria Thermotogota Wikipedia 1 2018 UNKNOWN
Thermotoga sp. rq2 Bacteria Thermotogota Wikipedia 1 2018 UNKNOWN

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CREATE TABLE Marine_Species (
        Species_name TEXT PRIMARY KEY,
        Domain TEXT,
        Phylum TEXT,
        Taxonomic_source TEXT,
        Is_deep_sea INTEGER,
        Deep_sea_source TEXT,
        is_ABNJ_present TEXT
    );
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