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Marine_Species

Catalogs marine species associated with genetic sequences in the dataset. It includes the species name, taxonomic classification (domain, phylum), and information on whether the species is considered deep-sea.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Species_name
Name of the marine species (Primary Key). Searchable
Domain
Taxonomic domain of the species
Phylum
Taxonomic phylum of the species
Taxonomic_source
Source of the taxonomic classification
Is_deep_sea
Indicates if the species is a deep-sea species (1 for yes, 0 for no)
Deep_sea_source
Source of information on the species' deep-sea status
Is_ABNJ_present
Indicates if the species is present in ABNJ (YES, NO, UNKNOWN)

114 rows where Domain = "Archaea"

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Suggested facets: Taxonomic_source, Deep_sea_source, is_ABNJ_present

Phylum 6

  • Euryarchaeota 90
  • Thermoproteota 10
  • Crenarchaeota 9
  • Nitrososphaerota 2
  • Thaumarchaeota 2
  • Candidatus Thermoplasmatota 1

Is_ABNJ_present 3

  • UNKNOWN 111
  • YES 2
  • NO 1

Is_deep_sea 2

  • 1 59
  • 0 55

Domain 1

  • Archaea · 114 ✖
Species_name ▼ Domain Phylum Taxonomic_source Is_deep_sea Deep_sea_source is_ABNJ_present
Aeropyrum camini sy1 = jcm 12091 Archaea Thermoproteota NCBI 1 https://img.jgi.doe.gov/cgi-bin/m/main.cgi?section=TaxonDetail&page=taxonDetail&taxon_oid=2675903482 UNKNOWN
Aeropyrum pernix Archaea Crenarchaeota WoRMS 1 2018 UNKNOWN
Aeropyrum pernix k1 Archaea Thermoproteota Wikipedia 1 2018 UNKNOWN
Archaeoglobus fulgidus Archaea Euryarchaeota WoRMS 1 2018 UNKNOWN
Archaeoglobus fulgidus dsm 4304 Archaea Euryarchaeota Wikipedia 1 2018 UNKNOWN
Archaeoglobus lithotrophicus Archaea Euryarchaeota WoRMS 1 2018 UNKNOWN
Archaeoglobus profundus Archaea Euryarchaeota WoRMS 1 2018 UNKNOWN
Archaeoglobus veneficus Archaea Euryarchaeota WoRMS 1 2018 UNKNOWN
Candidatus nitrosopumilus koreensis ar1 Archaea Nitrososphaerota NCBI 0   UNKNOWN
Cenarchaeum symbiosum Archaea Thaumarchaeota WoRMS 0 0 YES
Cenarchaeum symbiosum a Archaea Thermoproteota Wikipedia 0 0 UNKNOWN
Crenarchaeota Archaea Thermoproteota Wikipedia 0 0 UNKNOWN
Desulfurococcus amylolyticus Archaea Thermoproteota Wikipedia 0 0 UNKNOWN
Desulfurococcus sp. Archaea Thermoproteota Wikipedia 0 0 UNKNOWN
Haloferax mediterranei Archaea Euryarchaeota NCBI 0 0 UNKNOWN
Haloferax volcanii Archaea Euryarchaeota WoRMS 0   UNKNOWN
Hyperthermus butylicus Archaea Crenarchaeota WoRMS 0 0 UNKNOWN
Hyperthermus butylicus dsm 5456 Archaea Thermoproteota Wikipedia 0 0 UNKNOWN
Ignicoccus hospitalis Archaea Crenarchaeota WoRMS 1 2018 UNKNOWN
Methanocaldococcus Archaea Euryarchaeota Wikipedia 1 2018 UNKNOWN
Methanocaldococcus fervens Archaea Euryarchaeota WoRMS 0   UNKNOWN
Methanocaldococcus infernus Archaea Euryarchaeota WoRMS 0   UNKNOWN
Methanocaldococcus jannaschii Archaea Euryarchaeota WoRMS 1 2018 UNKNOWN
Methanocaldococcus jannaschii dsm 2661 Archaea Euryarchaeota Wikipedia 1 2018 UNKNOWN
Methanocaldococcus sp. Archaea Euryarchaeota NCBI 1 https://doi.org/10.1126/science.1134772 UNKNOWN
Methanocaldococcus villosus kin24-t80 Archaea Euryarchaeota NCBI 1 https://doi.org/10.1099/ijs.0.023663-0 UNKNOWN
Methanocaldococcus vulcanius Archaea Euryarchaeota WoRMS 0   UNKNOWN
Methanococcus aeolicus Archaea Euryarchaeota WoRMS 1 2018 UNKNOWN
Methanococcus maripaludis Archaea Euryarchaeota WoRMS 0 0 UNKNOWN
Methanococcus maripaludis s2 Archaea Euryarchaeota Wikipedia 0 0 UNKNOWN
Methanococcus vannielii Archaea Euryarchaeota WoRMS 0 0 UNKNOWN
Methanococcus voltae Archaea Euryarchaeota WoRMS 0   UNKNOWN
Methanoculleus bourgensis Archaea Euryarchaeota Wikipedia 0   UNKNOWN
Methanoculleus chikugoensis Archaea Euryarchaeota Wikipedia 0   UNKNOWN
Methanoculleus sp. cag:1088 Archaea Euryarchaeota Wikipedia 0   UNKNOWN
Methanoculleus sp. sdb Archaea Euryarchaeota Wikipedia 0   UNKNOWN
Methanopyrus kandleri Archaea Euryarchaeota Wikipedia 1 2018 UNKNOWN
Methanopyrus kandleri av19 Archaea Euryarchaeota Wikipedia 1 2018 UNKNOWN
Methanosarcina acetivorans Archaea Euryarchaeota WoRMS 0 0 UNKNOWN
Methanosarcina acetivorans c2a Archaea Euryarchaeota Wikipedia 0 0 UNKNOWN
Methanosarcina mazei Archaea Euryarchaeota WoRMS 0   UNKNOWN
Methanothermococcus thermolithotrophicus Archaea Euryarchaeota WoRMS 0 0 UNKNOWN
Methanotorris formicicus mc-s-70 Archaea Euryarchaeota NCBI 1 https://doi.org/10.1099/ijs.0.02887-0 UNKNOWN
Methanotorris igneus Archaea Euryarchaeota WoRMS 1 2018 UNKNOWN
Nitrosopumilus maritimus Archaea Thaumarchaeota WoRMS 0 0 YES
Nitrosopumilus sp Archaea Nitrososphaerota Wikipedia 0   UNKNOWN
Palaeococcus ferrophilus Archaea Euryarchaeota WoRMS 1 2018 UNKNOWN
Pyrobaculum aerophilum Archaea Crenarchaeota WoRMS 0 0 UNKNOWN
Pyrobaculum aerophilum str. im2 Archaea Thermoproteota Wikipedia 0 0 UNKNOWN
Pyrococcus Archaea Euryarchaeota Wikipedia 1 2018 UNKNOWN
Pyrococcus abyssi Archaea Euryarchaeota WoRMS 1 WoRDSS UNKNOWN
Pyrococcus abyssi ge5 Archaea Euryarchaeota Wikipedia 1 2018 UNKNOWN
Pyrococcus furiosus Archaea Euryarchaeota WoRMS 1 2018 UNKNOWN
Pyrococcus furiosus c Archaea Euryarchaeota WoRMS 1 2018 UNKNOWN
Pyrococcus furiosus dsm 3638 Archaea Euryarchaeota Wikipedia 1 2018 UNKNOWN
Pyrococcus furiosusorganism Archaea Euryarchaeota WoRMS 0 0 UNKNOWN
Pyrococcus glycovorans Archaea Euryarchaeota WoRMS 0   UNKNOWN
Pyrococcus horikoshii Archaea Euryarchaeota WoRMS 1 2018 UNKNOWN
Pyrococcus horikoshii ot3 Archaea Euryarchaeota Wikipedia 1 2018 UNKNOWN
Pyrococcus sp. Archaea Euryarchaeota Wikipedia 1 2018 UNKNOWN
Pyrococcus sp. na2 Archaea Euryarchaeota Wikipedia 1 https://img.jgi.doe.gov/cgi-bin/m/main.cgi?section=TaxonDetail&page=taxonDetail&taxon_oid=650716079 UNKNOWN
Pyrococcus woesei Archaea Euryarchaeota WoRMS 1 2018 UNKNOWN
Pyrococcus yayanosii Archaea Euryarchaeota WoRMS 0   UNKNOWN
Pyrodictium Archaea Thermoproteota Wikipedia 1 https://doi.org/10.1016/S0723-2020(83)80011-3 UNKNOWN
Pyrodictium abyssi Archaea Crenarchaeota WoRMS 0 0 UNKNOWN
Pyrodictium brockii Archaea Crenarchaeota WoRMS 0 0 UNKNOWN
Pyrodictium occultum Archaea Crenarchaeota WoRMS 0   UNKNOWN
Pyrolobus fumarii Archaea Crenarchaeota WoRMS 1 2018 UNKNOWN
Staphylothermus marinus Archaea Crenarchaeota WoRMS 0 0 UNKNOWN
Staphylothermus marinus f1 Archaea Thermoproteota Wikipedia 0 0 UNKNOWN
Thermococcus Archaea Euryarchaeota NCBI 1 2018 UNKNOWN
Thermococcus aggregans Archaea Euryarchaeota WoRMS 0   UNKNOWN
Thermococcus alcaliphilus Archaea Euryarchaeota WoRMS 0 0 UNKNOWN
Thermococcus barophilus Archaea Euryarchaeota WoRMS 1 2018 UNKNOWN
Thermococcus barossii Archaea Euryarchaeota WoRMS 0 0 UNKNOWN
Thermococcus celer Archaea Euryarchaeota Wikipedia 0 0 UNKNOWN
Thermococcus celer vu 13 = jcm 8558 Archaea Euryarchaeota NCBI 1 https://doi.org/10.1128/genomea.00037-18 UNKNOWN
Thermococcus celericrescens Archaea Euryarchaeota WoRMS 0   UNKNOWN
Thermococcus chitonophagus Archaea Euryarchaeota WoRMS 1 WoRDSS UNKNOWN
Thermococcus eurythermalis Archaea Euryarchaeota NCBI 1 https://doi.org/10.1099/ijs.0.067942-0 UNKNOWN
Thermococcus fumicolans Archaea Euryarchaeota WoRMS 0   UNKNOWN
Thermococcus gammatolerans Archaea Euryarchaeota WoRMS 0 0 UNKNOWN
Thermococcus gorgonarius Archaea Euryarchaeota WoRMS 1 2018 UNKNOWN
Thermococcus gorgonariusorganism Archaea Euryarchaeota NCBI 1 https://doi.org/10.1099/00207713-48-1-23 UNKNOWN
Thermococcus guaymasensis Archaea Euryarchaeota WoRMS 0 0 UNKNOWN
Thermococcus guaymasensis dsm 11113 Archaea Euryarchaeota NCBI 1 https://doi.org/10.1099/00207713-48-4-1181 UNKNOWN
Thermococcus hydrothermalis Archaea Euryarchaeota WoRMS 0   UNKNOWN
Thermococcus kodakarensis Archaea Euryarchaeota Wikipedia 0 0 UNKNOWN
Thermococcus kodakarensis kod1 Archaea Euryarchaeota Wikipedia 0 0 UNKNOWN
Thermococcus litoralis Archaea Euryarchaeota WoRMS 1 2018 UNKNOWN
Thermococcus marinus Archaea Euryarchaeota WoRMS 0 0 UNKNOWN
Thermococcus nautili Archaea Euryarchaeota NCBI 1 https://doi.org/10.1099/ijs.0.060376-0 UNKNOWN
Thermococcus onnurineus Archaea Euryarchaeota WoRMS 0 0 UNKNOWN
Thermococcus onnurineus na1 Archaea Euryarchaeota NCBI 1 https://img.jgi.doe.gov/cgi-bin/m/main.cgi?section=TaxonDetail&page=taxonDetail&taxon_oid=643348580 UNKNOWN
Thermococcus pacificus Archaea Euryarchaeota WoRMS 1 2018 UNKNOWN
Thermococcus peptonophilus Archaea Euryarchaeota WoRMS 0   UNKNOWN
Thermococcus piezophilus Archaea Euryarchaeota NCBI 1 https://doi.org/10.1016/j.syapm.2016.08.003 UNKNOWN
Thermococcus profundus Archaea Euryarchaeota WoRMS 0 0 UNKNOWN
Thermococcus radiotolerans Archaea Euryarchaeota WoRMS 0 0 UNKNOWN
Thermococcus siculi Archaea Euryarchaeota WoRMS 1 2018 NO

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CREATE TABLE Marine_Species (
        Species_name TEXT PRIMARY KEY,
        Domain TEXT,
        Phylum TEXT,
        Taxonomic_source TEXT,
        Is_deep_sea INTEGER,
        Deep_sea_source TEXT,
        is_ABNJ_present TEXT
    );
Powered by Datasette · Queries took 162.583ms · Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT