Marine_Species

Catalogs marine species associated with genetic sequences in the dataset. It includes the species name, taxonomic classification (domain, phylum), and information on whether the species is considered deep-sea.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Species_name
Name of the marine species (Primary Key). Searchable
Domain
Taxonomic domain of the species
Phylum
Taxonomic phylum of the species
Taxonomic_source
Source of the taxonomic classification
Is_deep_sea
Indicates if the species is a deep-sea species (1 for yes, 0 for no)
Deep_sea_source
Source of information on the species' deep-sea status
Is_ABNJ_present
Indicates if the species is present in ABNJ (YES, NO, UNKNOWN)

902 rows where Domain = "Bacteria"

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Suggested facets: Taxonomic_source, is_ABNJ_present

Is_ABNJ_present 3

Is_deep_sea 2

  • 0 802
  • 1 98

Domain 1

  • Bacteria · 902 ✖
Species_name ▼ Domain Phylum Taxonomic_source Is_deep_sea Deep_sea_source is_ABNJ_present
Acaryochloris Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Acaryochloris marina Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Acaryochloris marina mbic11017 Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Aequorivita antarctica Bacteria Bacteroidetes WoRMS 0   UNKNOWN
Aeromicrobium marinum dsm 15272 Bacteria Actynomycetota NCBI 0   UNKNOWN
Aeromonas molluscorum 848 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Aeromonas salmonicida Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Aeromonas salmonicida subsp. salmonicida Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Aeromonas salmonicida subsp. salmonicida a449 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Agarivorans albus Bacteria Proteobacteria WoRMS 0 0 YES
Alcanivorax Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1099/ijs.0.049957-0 UNKNOWN
Alcanivorax borkumensis Bacteria Proteobacteria WoRMS 0 0 YES
Alcanivorax borkumensis sk2 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Alcanivorax hongdengensis Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Alcanivorax jadensis Bacteria Proteobacteria WoRMS 0 0 YES
Alcanivorax nanhaiticus Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax pacificus Bacteria Pseudomonadota Wikipedia 1 2018 UNKNOWN
Alcanivorax sp Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. dg881 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. k Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. k2-1 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. k3-3 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. nbrc 101096 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. nbrc 102022 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. nbrc 102027 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. st-ta Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. vbw004 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. z Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Algibacter aquaticus Bacteria Bacteroidota NCBI 0   UNKNOWN
Algibacter lectus Bacteria Bacteroidetes WoRMS 0 0 NO
Algibacter marinivivus Bacteria Bacteroidota NCBI 0   UNKNOWN
Aliivibrio fischeri Bacteria Proteobacteria WoRMS 0 0 YES
Aliivibrio fischeri es114 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Aliivibrio logei Bacteria Proteobacteria WoRMS 0   UNKNOWN
Aliivibrio salmonicida Bacteria Proteobacteria WoRMS 0 0 YES
Aliivibrio salmonicida lfi1238 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Aliivibrio wodanis Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Alteromonas aestuariivivens Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alteromonas australica Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alteromonas macleodii Bacteria Proteobacteria WoRMS 1 2018 YES
Alteromonas macleodii atcc 27126 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Alteromonas mediterranea Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alteromonas mediterranea de Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1007/s10482-014-0309-y UNKNOWN
Alteromonas sp. Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1007/s00203-022-02908-8 UNKNOWN
Alteromonas sp. gnum-1 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Alteromonas sp. tmed35 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alvinella pompejana epibiont 6c6 Bacteria Proteobacteria NCBI 1 2018 UNKNOWN
Anabaena cylindrica Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Anabaena cylindrica pcc 7122 Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Anabaena laxa Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Anabaena sp Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Anabaena sp. al09 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Anabaena sp. ch1 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Anabaena sp. pcc 7108 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Anabaena sp. ybs01 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Aquifex aeolicus Bacteria Aquificota Wikipedia 0   UNKNOWN
Aquifex pyrophilus Bacteria Aquificae WoRMS 1 2018 UNKNOWN
Aquimarina macrocephali Bacteria Bacteroidetes WoRMS 0 0 UNKNOWN
Arenibacter echinorum Bacteria Bacteroidetes WoRMS 0   UNKNOWN
Arenimonas sp Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Arthrospira platensis Bacteria Cyanobacteria Wikipedia 0 0 NO
Arthrospira platensis c1 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Arthrospira platensis fachb-341 Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Arthrospira platensis kmmcc cy-007 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Arthrospira platensis nies-39 Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Arthrospira sp. srm16 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Aurantimonas Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1080/01490450902724840 UNKNOWN
Aurantimonas manganoxydans Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Aurantimonas manganoxydans si85-9a1 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Aureispira marina Bacteria Bacteroidetes WoRMS 0 0 UNKNOWN
Bacillus altitudinis Bacteria Bacillota NCBI 0   UNKNOWN
Bacillus tropicus Bacteria Bacillota NCBI 0   UNKNOWN
Bacillus xiamenensis Bacteria Bacillota NCBI 0   UNKNOWN
Belliella Bacteria Bacteroidota Wikipedia 0 0 UNKNOWN
Belliella baltica Bacteria Bacteroidetes WoRMS 0   UNKNOWN
Bermanella marisrubri Bacteria Proteobacteria WoRMS 0 0 YES
Bizionia algoritergicola Bacteria Bacteroidetes WoRMS 0   UNKNOWN
Bizionia paragorgiae Bacteria Bacteroidetes WoRMS 0   NO
Bizionia saleffrena Bacteria Bacteroidetes WoRMS 0   NO
Blastopirellula marina Bacteria Planctomycetes WoRMS 0 0 YES
Blastopirellula marina dsm 3645 Bacteria Planctomycetota Wikipedia 0 0 UNKNOWN
Caldithrix abyssi Bacteria Bacteria incertae sedis WoRMS 1 WoRDSS YES
Caldithrix abyssi dsm 13497 Bacteria Calditrichota NCBI 1 WoRDSS UNKNOWN
Caldithrix sp Bacteria Calditrichota NCBI 0   UNKNOWN
Calditrix abyssi Bacteria Calditrichaeota NCBI 1 https://doi.org/10.1099/ijs.0.02390-0 UNKNOWN
Calothrix sp. Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Caminibacter hydrogeniphilus Bacteria Proteobacteria WoRMS 1 2018 UNKNOWN
Caminibacter mediatlanticus Bacteria Proteobacteria WoRMS 1 2018 UNKNOWN
Caminibacter mediatlanticus tb-2 Bacteria Campylobacterota Wikipedia 1 2018 UNKNOWN
Candidatus endobugula sertula Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Candidatus pelagibacter Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Candidatus pelagibacter ubique Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Candidatus sulfurimonas baltica Bacteria Campylobacterota NCBI 0   UNKNOWN
Candidatus sulfurimonas marisnigri Bacteria Campylobacterota NCBI 0   UNKNOWN
Cellulophaga Bacteria Bacteroidota Wikipedia 0 0 UNKNOWN
Cellulophaga baltica Bacteria Bacteroidetes WoRMS 0   UNKNOWN
Cellulophaga lytica Bacteria Bacteroidetes WoRMS 0 0 YES
Cellulophaga omnivescoria Bacteria Bacteroidota NCBI 0   UNKNOWN
Chimaera sp. Bacteria Actinomycetota Wikipedia 0 0 UNKNOWN
Chlorobium phaeobacteroides Bacteria Chlorobiota Wikipedia 0 0 UNKNOWN

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CREATE TABLE Marine_Species (
        Species_name TEXT PRIMARY KEY,
        Domain TEXT,
        Phylum TEXT,
        Taxonomic_source TEXT,
        Is_deep_sea INTEGER,
        Deep_sea_source TEXT,
        is_ABNJ_present TEXT
    );