Marine_Species

Catalogs marine species associated with genetic sequences in the dataset. It includes the species name, taxonomic classification (domain, phylum), and information on whether the species is considered deep-sea.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Species_name
Name of the marine species (Primary Key). Searchable
Domain
Taxonomic domain of the species
Phylum
Taxonomic phylum of the species
Taxonomic_source
Source of the taxonomic classification
Is_deep_sea
Indicates if the species is a deep-sea species (1 for yes, 0 for no)
Deep_sea_source
Source of information on the species' deep-sea status
Is_ABNJ_present
Indicates if the species is present in ABNJ (YES, NO, UNKNOWN)

361 rows where Domain = "Bacteria", Is_ABNJ_present = "UNKNOWN" and Taxonomic_source = "Wikipedia"

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Suggested facets: Deep_sea_source

Is_deep_sea 2

  • 0 311
  • 1 50

Is_ABNJ_present 1

  • UNKNOWN · 361 ✖

Domain 1

  • Bacteria · 361 ✖
Species_name ▼ Domain Phylum Taxonomic_source Is_deep_sea Deep_sea_source is_ABNJ_present
Acaryochloris Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Acaryochloris marina Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Acaryochloris marina mbic11017 Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Aeromonas molluscorum 848 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Aeromonas salmonicida subsp. salmonicida Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Aeromonas salmonicida subsp. salmonicida a449 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Alcanivorax Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1099/ijs.0.049957-0 UNKNOWN
Alcanivorax borkumensis sk2 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Alcanivorax nanhaiticus Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax pacificus Bacteria Pseudomonadota Wikipedia 1 2018 UNKNOWN
Alcanivorax sp Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. dg881 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. k Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. k2-1 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. k3-3 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. nbrc 101096 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. nbrc 102022 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. nbrc 102027 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. st-ta Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. vbw004 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. z Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Aliivibrio fischeri es114 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Aliivibrio salmonicida lfi1238 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Alteromonas aestuariivivens Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alteromonas australica Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alteromonas macleodii atcc 27126 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Alteromonas mediterranea Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alteromonas mediterranea de Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1007/s10482-014-0309-y UNKNOWN
Alteromonas sp. Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1007/s00203-022-02908-8 UNKNOWN
Alteromonas sp. gnum-1 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Alteromonas sp. tmed35 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Anabaena cylindrica Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Anabaena cylindrica pcc 7122 Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Anabaena laxa Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Anabaena sp Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Anabaena sp. al09 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Anabaena sp. ch1 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Anabaena sp. pcc 7108 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Anabaena sp. ybs01 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Aquifex aeolicus Bacteria Aquificota Wikipedia 0   UNKNOWN
Arenimonas sp Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Arthrospira platensis c1 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Arthrospira platensis fachb-341 Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Arthrospira platensis kmmcc cy-007 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Arthrospira platensis nies-39 Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Arthrospira sp. srm16 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Aurantimonas Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1080/01490450902724840 UNKNOWN
Aurantimonas manganoxydans si85-9a1 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Belliella Bacteria Bacteroidota Wikipedia 0 0 UNKNOWN
Blastopirellula marina dsm 3645 Bacteria Planctomycetota Wikipedia 0 0 UNKNOWN
Calothrix sp. Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Caminibacter mediatlanticus tb-2 Bacteria Campylobacterota Wikipedia 1 2018 UNKNOWN
Cellulophaga Bacteria Bacteroidota Wikipedia 0 0 UNKNOWN
Chimaera sp. Bacteria Actinomycetota Wikipedia 0 0 UNKNOWN
Chlorobium phaeobacteroides Bacteria Chlorobiota Wikipedia 0 0 UNKNOWN
Chlorobium phaeobacteroides bs1 Bacteria Chlorobiota Wikipedia 0 0 UNKNOWN
Colwellia psychrerythraea 34h Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Congregibacter litoralis kt71 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Croceibacter atlanticus htcc2559 Bacteria Bacteroidota Wikipedia 0 0 UNKNOWN
Crocosphaera watsonii Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Crocosphaera watsonii wh 8501 Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Cyanothece Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Cyanothece sp. pcc 7425 Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Denitrovibrio acetiphilus dsm 12809 Bacteria Deferribacterota Wikipedia 0 0 UNKNOWN
Desulfobacter curvatus Bacteria Thermodesulfobacteriota Wikipedia 0 0 UNKNOWN
Dinoroseobacter shibae dfl 12 = dsm 16493 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Dokdonia sp. med134 Bacteria Bacteroidota Wikipedia 0 0 UNKNOWN
Ectothiorhodospira Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Erythrobacter litoralis htcc2594 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Erythrobacter sp. Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1099/ijsem.0.003136 UNKNOWN
Erythrobacter sp. nap1 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Erythrobacter sp. sd-21 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Flavobacteriales Bacteria Bacteroidota Wikipedia 0 0 UNKNOWN
Flavobacteriales bacterium alc-1 Bacteria Bacteroidota Wikipedia 0 0 UNKNOWN
Gamma proteobacterium 'hot 75m4' Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Gamma proteobacterium htcc2207 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Gammaproteobacteria Bacteria Pseudomonadota Wikipedia 1 2018 UNKNOWN
Gammaproteobacteria bacterium Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Geobacillus kaustophilus hta426 Bacteria Bacillota Wikipedia 1 2018 UNKNOWN
Gramella forsetii kt0803 Bacteria Bacteroidota Wikipedia 0 0 UNKNOWN
Hahella chejuensis kctc 2396 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Halomonas titanicae Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1099/ijs.0.020628-0 UNKNOWN
Hydrogenovibrio crunogenus Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1128/jb.187.16.5761-5766.2005 UNKNOWN
Hyphomonas neptunium atcc 15444 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Idiomarina loihiensis l2tr Bacteria Pseudomonadota Wikipedia 1 2018 UNKNOWN
Idiomarina sp Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Idiomarina sp. Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Idiomarina sp. h2 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Idiomarina sp. md25a Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Jannaschia Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Jannaschia sp. Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Jannaschia sp. ccs1 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Jeotgalibacillus alimentarius Bacteria Bacillota Wikipedia 0   UNKNOWN
Jeotgalibacillus malaysiensis Bacteria Bacillota Wikipedia 0   UNKNOWN
Kordia jejudonensis Bacteria Bacteroidota Wikipedia 0 0 UNKNOWN
Lactococcus garvieae Bacteria Bacillota Wikipedia 0 0 UNKNOWN
Leeuwenhoekiella aequorea Bacteria Bacteroidota Wikipedia 0   UNKNOWN
Leeuwenhoekiella blandensis Bacteria Bacteroidota Wikipedia 0   UNKNOWN
Leeuwenhoekiella blandensis med217 Bacteria Bacteroidota Wikipedia 0 0 UNKNOWN
Leeuwenhoekiella nanhaiensis Bacteria Bacteroidota Wikipedia 1 https://doi.org/10.1099/ijsem.0.000883 UNKNOWN

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CREATE TABLE Marine_Species (
        Species_name TEXT PRIMARY KEY,
        Domain TEXT,
        Phylum TEXT,
        Taxonomic_source TEXT,
        Is_deep_sea INTEGER,
        Deep_sea_source TEXT,
        is_ABNJ_present TEXT
    );