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Marine_Species

Catalogs marine species associated with genetic sequences in the dataset. It includes the species name, taxonomic classification (domain, phylum), and information on whether the species is considered deep-sea.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Species_name
Name of the marine species (Primary Key). Searchable
Domain
Taxonomic domain of the species
Phylum
Taxonomic phylum of the species
Taxonomic_source
Source of the taxonomic classification
Is_deep_sea
Indicates if the species is a deep-sea species (1 for yes, 0 for no)
Deep_sea_source
Source of information on the species' deep-sea status
Is_ABNJ_present
Indicates if the species is present in ABNJ (YES, NO, UNKNOWN)

192 rows where Is_ABNJ_present = "UNKNOWN", Is_deep_sea = 0 and Taxonomic_source = "WoRMS"

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Phylum 30

  • Proteobacteria 84
  • Euryarchaeota 26
  • Bacteroidetes 20
  • Bigyra 6
  • Crenarchaeota 6
  • Myzozoa 6
  • Arthropoda 5
  • Actinobacteria 4
  • Chordata 4
  • Firmicutes 4
  • Ochrophyta 3
  • Chlorobi 2
  • Cnidaria 2
  • Deinococcus-Thermus 2
  • Mollusca 2
  • Thermotogae 2
  • Annelida 1
  • Ascomycota 1
  • Chlorophyta 1
  • Choanozoa 1
  • Ciliophora 1
  • Deferribacteres 1
  • Incertae sedis 1
  • Mezozoa 1
  • Placozoa 1
  • Planctomycetes 1
  • Platyhelminthes 1
  • Rhodophyta 1
  • Synergistetes 1
  • Tracheophyta 1

Domain 4

  • Bacteria 121
  • Eukaryota 38
  • Archaea 32
  • Viruses 1

Is_deep_sea 1

  • - · 192 ✖

Is_ABNJ_present 1

  • UNKNOWN · 192 ✖
Species_name ▼ Domain Phylum Taxonomic_source Is_deep_sea Deep_sea_source is_ABNJ_present
Acropora formosa Eukaryota Cnidaria WoRMS 0 0 UNKNOWN
Aequorivita antarctica Bacteria Bacteroidetes WoRMS 0   UNKNOWN
Aeromonas salmonicida Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Alcanivorax hongdengensis Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Alexandrium Eukaryota Myzozoa WoRMS 0 0 UNKNOWN
Aliivibrio logei Bacteria Proteobacteria WoRMS 0   UNKNOWN
Aliivibrio wodanis Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Aquimarina macrocephali Bacteria Bacteroidetes WoRMS 0 0 UNKNOWN
Arenibacter echinorum Bacteria Bacteroidetes WoRMS 0   UNKNOWN
Aurantimonas manganoxydans Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Aureispira marina Bacteria Bacteroidetes WoRMS 0 0 UNKNOWN
Belliella baltica Bacteria Bacteroidetes WoRMS 0   UNKNOWN
Bizionia algoritergicola Bacteria Bacteroidetes WoRMS 0   UNKNOWN
Bruguiera gymnorhiza Eukaryota Tracheophyta WoRMS 0 0 UNKNOWN
Caligus rogercresseyi Eukaryota Arthropoda WoRMS 0 0 UNKNOWN
Candidatus pelagibacter Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Cellulophaga baltica Bacteria Bacteroidetes WoRMS 0   UNKNOWN
Chlorobium phaeovibrioides Bacteria Chlorobi WoRMS 0   UNKNOWN
Colwellia chukchiensis Bacteria Proteobacteria WoRMS 0   UNKNOWN
Colwellia demingiae Bacteria Proteobacteria WoRMS 0   UNKNOWN
Crassostrea angulata Eukaryota Mollusca WoRMS 0 0 UNKNOWN
Crassostrea gigas Eukaryota Mollusca WoRMS 0 0 UNKNOWN
Crypthecodinium Eukaryota Myzozoa WoRMS 0 0 UNKNOWN
Curtobacterium oceanosedimentum Bacteria Actinobacteria WoRMS 0 0 UNKNOWN
Cyanea nozakii Eukaryota Cnidaria WoRMS 0 0 UNKNOWN
Denitrovibrio acetiphilus Bacteria Deferribacteres WoRMS 0 0 UNKNOWN
Desulfobacula phenolica Bacteria Proteobacteria WoRMS 0   UNKNOWN
Desulfobacula toluolica Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Desulfotalea psychrophila Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Dethiosulfovibrio peptidovorans Bacteria Synergistetes WoRMS 0 0 UNKNOWN
Dinoroseobacter shibae Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Fibrella aestuarina Bacteria Bacteroidetes WoRMS 0 0 UNKNOWN
Flavobacterium frigidimaris Bacteria Bacteroidetes WoRMS 0   UNKNOWN
Fulvimarina pelagi Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Gelidibacter salicanalis Bacteria Bacteroidetes WoRMS 0   UNKNOWN
Gracilaria tenuistipitata var. liui Eukaryota Rhodophyta WoRMS 0   UNKNOWN
Gramella forsetii Bacteria Bacteroidetes WoRMS 0 0 UNKNOWN
Hahella chejuensis Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Haloferax volcanii Archaea Euryarchaeota WoRMS 0   UNKNOWN
Heterocapsa triquetra Eukaryota Myzozoa WoRMS 0 0 UNKNOWN
Hippea maritima Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Hydrogenovibrio marinus Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Hyperthermus butylicus Archaea Crenarchaeota WoRMS 0 0 UNKNOWN
Hyphomonas adhaerens Bacteria Proteobacteria WoRMS 0   UNKNOWN
Hyphomonas neptunium Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Jannaschia donghaensis Bacteria Proteobacteria WoRMS 0   UNKNOWN
Jannaschia rubra Bacteria Proteobacteria WoRMS 0   UNKNOWN
Kangiella koreensis Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Leeuwenhoekiella marinoflava Bacteria Bacteroidetes WoRMS 0   UNKNOWN
Lepeophtheirus salmonis Eukaryota Arthropoda WoRMS 0 0 UNKNOWN
Lucicutia ovaliformis Eukaryota Arthropoda WoRMS 0 0 UNKNOWN
Magnetococcus marinus Bacteria Proteobacteria WoRMS 0   UNKNOWN
Maribacter arcticus Bacteria Bacteroidetes WoRMS 0   UNKNOWN
Maribacter polysiphoniae Bacteria Bacteroidetes WoRMS 0   UNKNOWN
Maribacter ulvicola Bacteria Bacteroidetes WoRMS 0   UNKNOWN
Marinithermus hydrothermalis Bacteria Deinococcus-Thermus WoRMS 0 0 UNKNOWN
Marinobacter pelagius Bacteria Proteobacteria WoRMS 0   UNKNOWN
Marinobacter zhejiangensis Bacteria Proteobacteria WoRMS 0   UNKNOWN
Marinomonas aquimarina Bacteria Proteobacteria WoRMS 0   UNKNOWN
Marinomonas primoryensis Bacteria Proteobacteria WoRMS 0   UNKNOWN
Marinomonas ushuaiensis Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Methanocaldococcus fervens Archaea Euryarchaeota WoRMS 0   UNKNOWN
Methanocaldococcus infernus Archaea Euryarchaeota WoRMS 0   UNKNOWN
Methanocaldococcus vulcanius Archaea Euryarchaeota WoRMS 0   UNKNOWN
Methanococcus maripaludis Archaea Euryarchaeota WoRMS 0 0 UNKNOWN
Methanococcus vannielii Archaea Euryarchaeota WoRMS 0 0 UNKNOWN
Methanococcus voltae Archaea Euryarchaeota WoRMS 0   UNKNOWN
Methanosarcina acetivorans Archaea Euryarchaeota WoRMS 0 0 UNKNOWN
Methanosarcina mazei Archaea Euryarchaeota WoRMS 0   UNKNOWN
Methanothermococcus thermolithotrophicus Archaea Euryarchaeota WoRMS 0 0 UNKNOWN
Metschnikowia bicuspidata Eukaryota Ascomycota WoRMS 0   UNKNOWN
Micromonas rcc299 3 Eukaryota Chlorophyta WoRMS 0 0 UNKNOWN
Moneuplotes crassus Eukaryota Ciliophora WoRMS 0 0 UNKNOWN
Monosiga brevicollis Eukaryota Choanozoa WoRMS 0 0 UNKNOWN
Moritella japonica Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Nannochloropsis gaditana ccmp526 Eukaryota Ochrophyta WoRMS 0 0 UNKNOWN
Nannochloropsis granulata Eukaryota Ochrophyta WoRMS 0 0 UNKNOWN
Neobenedenia girellae Eukaryota Platyhelminthes WoRMS 0 0 UNKNOWN
Neptuniibacter caesariensis Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Oceanicola granulosus Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Oceanithermus profundus Bacteria Deinococcus-Thermus WoRMS 0 0 UNKNOWN
Octadecabacter antarcticus Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Octadecabacter antarcticus 307 Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Oikopleura dioica Eukaryota Chordata WoRMS 0 0 UNKNOWN
Paracoccus haeundaensis Bacteria Proteobacteria WoRMS 0   UNKNOWN
Paracoccus zeaxanthinifaciens Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Parvibaculum lavamentivorans Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Peridinium sp. Eukaryota Myzozoa WoRMS 0 0 UNKNOWN
Perkinsus chesapeaki Eukaryota Myzozoa WoRMS 0   UNKNOWN
Petrotoga mobilis Bacteria Thermotogae WoRMS 0 0 UNKNOWN
Photobacterium aquimaris Bacteria Proteobacteria WoRMS 0   UNKNOWN
Photobacterium frigidiphilum Bacteria Proteobacteria WoRMS 0   UNKNOWN
Photobacterium ganghwense Bacteria Proteobacteria WoRMS 0   UNKNOWN
Photobacterium indicum Bacteria Proteobacteria WoRMS 0   UNKNOWN
Photobacterium kishitanii Bacteria Proteobacteria WoRMS 0   UNKNOWN
Photobacterium lipolyticum Bacteria Proteobacteria WoRMS 0   UNKNOWN
Physeter catodon Eukaryota Chordata WoRMS 0 0 UNKNOWN
Planococcus citreus Bacteria Firmicutes WoRMS 0   UNKNOWN
Planomicrobium okeanokoites Bacteria Firmicutes WoRMS 0 0 UNKNOWN
Pleuromamma abdominalis Eukaryota Arthropoda WoRMS 0 0 UNKNOWN

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CREATE TABLE Marine_Species (
        Species_name TEXT PRIMARY KEY,
        Domain TEXT,
        Phylum TEXT,
        Taxonomic_source TEXT,
        Is_deep_sea INTEGER,
        Deep_sea_source TEXT,
        is_ABNJ_present TEXT
    );
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