home / MABPAT_dataset

Marine_Species

Catalogs marine species associated with genetic sequences in the dataset. It includes the species name, taxonomic classification (domain, phylum), and information on whether the species is considered deep-sea.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Species_name
Name of the marine species (Primary Key). Searchable
Domain
Taxonomic domain of the species
Phylum
Taxonomic phylum of the species
Taxonomic_source
Source of the taxonomic classification
Is_deep_sea
Indicates if the species is a deep-sea species (1 for yes, 0 for no)
Deep_sea_source
Source of information on the species' deep-sea status
Is_ABNJ_present
Indicates if the species is present in ABNJ (YES, NO, UNKNOWN)

117 rows where Is_ABNJ_present = "UNKNOWN" and Phylum = "Proteobacteria"

✎ View and edit SQL

This data as json, CSV (advanced)

Suggested facets: Taxonomic_source, Deep_sea_source

Is_deep_sea 2

  • 0 108
  • 1 9

Phylum 1

  • Proteobacteria · 117 ✖

Is_ABNJ_present 1

  • UNKNOWN · 117 ✖

Domain 1

  • Bacteria 117
Species_name ▼ Domain Phylum Taxonomic_source Is_deep_sea Deep_sea_source is_ABNJ_present
Aeromonas salmonicida Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Alcanivorax hongdengensis Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Aliivibrio logei Bacteria Proteobacteria WoRMS 0   UNKNOWN
Aliivibrio wodanis Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Alvinella pompejana epibiont 6c6 Bacteria Proteobacteria NCBI 1 2018 UNKNOWN
Aurantimonas manganoxydans Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Caminibacter hydrogeniphilus Bacteria Proteobacteria WoRMS 1 2018 UNKNOWN
Caminibacter mediatlanticus Bacteria Proteobacteria WoRMS 1 2018 UNKNOWN
Candidatus endobugula sertula Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Candidatus pelagibacter Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Candidatus pelagibacter ubique Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Colwellia chukchiensis Bacteria Proteobacteria WoRMS 0   UNKNOWN
Colwellia demingiae Bacteria Proteobacteria WoRMS 0   UNKNOWN
Desulfobacula phenolica Bacteria Proteobacteria WoRMS 0   UNKNOWN
Desulfobacula toluolica Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Desulfomicrobium baculatum Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Desulfomicrobium baculatum dsm 4028 Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Desulfotalea psychrophila Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Desulfotalea psychrophila lsv54 Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Dinoroseobacter shibae Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Fulvimarina pelagi Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Hahella chejuensis Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Hippea maritima Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Hydrogenovibrio marinus Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Hyphomonas adhaerens Bacteria Proteobacteria WoRMS 0   UNKNOWN
Hyphomonas neptunium Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Jannaschia donghaensis Bacteria Proteobacteria WoRMS 0   UNKNOWN
Jannaschia rubra Bacteria Proteobacteria WoRMS 0   UNKNOWN
Kangiella koreensis Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Magnetococcus marinus Bacteria Proteobacteria WoRMS 0   UNKNOWN
Marinobacter manganoxydans mni7-9 Bacteria Proteobacteria NCBI 1 2018 UNKNOWN
Marinobacter pelagius Bacteria Proteobacteria WoRMS 0   UNKNOWN
Marinobacter zhejiangensis Bacteria Proteobacteria WoRMS 0   UNKNOWN
Marinomonas aquimarina Bacteria Proteobacteria WoRMS 0   UNKNOWN
Marinomonas primoryensis Bacteria Proteobacteria WoRMS 0   UNKNOWN
Marinomonas ushuaiensis Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Moritella japonica Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Moritella profunda Bacteria Proteobacteria WoRMS 1 2018 UNKNOWN
Moritella sp. pe36 Bacteria Proteobacteria NCBI 1 2018 UNKNOWN
Moritella viscosa Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Neptuniibacter caesariensis Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Nitratireductor indicus Bacteria Proteobacteria WoRMS 1 2018 UNKNOWN
Nitrococcus mobilis nb-231 Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Oceanicola granulosus Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Octadecabacter antarcticus Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Octadecabacter antarcticus 307 Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Paracoccus haeundaensis Bacteria Proteobacteria WoRMS 0   UNKNOWN
Paracoccus zeaxanthinifaciens Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Parvibaculum lavamentivorans Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Photobacterium aquimaris Bacteria Proteobacteria WoRMS 0   UNKNOWN
Photobacterium frigidiphilum Bacteria Proteobacteria WoRMS 0   UNKNOWN
Photobacterium ganghwense Bacteria Proteobacteria WoRMS 0   UNKNOWN
Photobacterium indicum Bacteria Proteobacteria WoRMS 0   UNKNOWN
Photobacterium kishitanii Bacteria Proteobacteria WoRMS 0   UNKNOWN
Photobacterium lipolyticum Bacteria Proteobacteria WoRMS 0   UNKNOWN
Pseudoalteromonas atlantica Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Pseudoalteromonas flavipulchra Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Pseudoalteromonas nigrifaciens Bacteria Proteobacteria WoRMS 0   UNKNOWN
Pseudoalteromonas piscicida Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Pseudoalteromonas tetraodonis Bacteria Proteobacteria WoRMS 0   UNKNOWN
Pseudoalteromonas tunicata Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Pseudovibrio denitrificans Bacteria Proteobacteria WoRMS 0   UNKNOWN
Pseudovibrio sp. fo-beg1 Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Psychrobacter maritimus Bacteria Proteobacteria WoRMS 0   UNKNOWN
Psychromonas ingrahamii 37 Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Reinekea sp. Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Rhodovulum strictum Bacteria Proteobacteria WoRMS 0   UNKNOWN
Rhodovulum sulfidophilum Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Roseobacter litoralis Bacteria Proteobacteria WoRMS 0   UNKNOWN
Roseovarius mucosus Bacteria Proteobacteria WoRMS 0   UNKNOWN
Shewanella algae Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Shewanella canadensis Bacteria Proteobacteria WoRMS 0   UNKNOWN
Shewanella colwelliana Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Shewanella denitrificans Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Shewanella hafniensis Bacteria Proteobacteria WoRMS 0   UNKNOWN
Shewanella hanedai Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Shewanella loihica Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Shewanella marinintestina Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Shewanella massilia Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Shewanella morhuae Bacteria Proteobacteria WoRMS 0   UNKNOWN
Shewanella olleyana Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Shewanella piezotolerans Bacteria Proteobacteria WoRMS 0   UNKNOWN
Shewanella pneumatophori Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Shewanella putida Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Shewanella xiamenensis Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Sulfitobacter delicatus Bacteria Proteobacteria WoRMS 0   UNKNOWN
Sulfitobacter litoralis Bacteria Proteobacteria WoRMS 0   UNKNOWN
Sulfurimonas denitrificans Bacteria Proteobacteria WoRMS 1 2018 UNKNOWN
Teredinibacter Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Teredinibacter turnerae t7901 Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Thalassospira profundimaris Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Thiocapsa roseopersicina Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Uncultured marine alpha proteobacterium hot2c01 Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Uncultured marine gamma proteobacterium ebac20e09 Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Uncultured marine proteobacterium ant8c10 Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Uncultured vibrio sp Bacteria Proteobacteria NCBI 0   UNKNOWN
Vibrio anguillarum Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Vibrio antiquarius Bacteria Proteobacteria NCBI 1 https://doi.org/10.1073/pnas.1503928112 UNKNOWN
Vibrio chagasii Bacteria Proteobacteria WoRMS 0   UNKNOWN
Vibrio diabolicus Bacteria Proteobacteria WoRMS 0   UNKNOWN

Next page

Advanced export

JSON shape: default, array, newline-delimited, object

CSV options:

CREATE TABLE Marine_Species (
        Species_name TEXT PRIMARY KEY,
        Domain TEXT,
        Phylum TEXT,
        Taxonomic_source TEXT,
        Is_deep_sea INTEGER,
        Deep_sea_source TEXT,
        is_ABNJ_present TEXT
    );
Powered by Datasette · Queries took 11.464ms · Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT