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Marine_Species

Catalogs marine species associated with genetic sequences in the dataset. It includes the species name, taxonomic classification (domain, phylum), and information on whether the species is considered deep-sea.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Species_name
Name of the marine species (Primary Key). Searchable
Domain
Taxonomic domain of the species
Phylum
Taxonomic phylum of the species
Taxonomic_source
Source of the taxonomic classification
Is_deep_sea
Indicates if the species is a deep-sea species (1 for yes, 0 for no)
Deep_sea_source
Source of information on the species' deep-sea status
Is_ABNJ_present
Indicates if the species is present in ABNJ (YES, NO, UNKNOWN)

373 rows where Is_ABNJ_present = "UNKNOWN" and Phylum = "Pseudomonadota"

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Suggested facets: Taxonomic_source, Deep_sea_source

Is_deep_sea 2

  • 0 324
  • 1 47

Phylum 1

  • Pseudomonadota · 373 ✖

Is_ABNJ_present 1

  • UNKNOWN · 373 ✖

Domain 1

  • Bacteria 373
Species_name ▼ Domain Phylum Taxonomic_source Is_deep_sea Deep_sea_source is_ABNJ_present
Aeromonas molluscorum 848 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Aeromonas salmonicida subsp. salmonicida Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Aeromonas salmonicida subsp. salmonicida a449 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Alcanivorax Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1099/ijs.0.049957-0 UNKNOWN
Alcanivorax borkumensis sk2 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Alcanivorax nanhaiticus Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax pacificus Bacteria Pseudomonadota Wikipedia 1 2018 UNKNOWN
Alcanivorax sp Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. dg881 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. k Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. k2-1 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. k3-3 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. nbrc 101096 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. nbrc 102022 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. nbrc 102027 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. st-ta Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. vbw004 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. z Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Aliivibrio fischeri es114 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Aliivibrio salmonicida lfi1238 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Alteromonas aestuariivivens Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alteromonas australica Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alteromonas macleodii atcc 27126 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Alteromonas mediterranea Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alteromonas mediterranea de Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1007/s10482-014-0309-y UNKNOWN
Alteromonas sp. Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1007/s00203-022-02908-8 UNKNOWN
Alteromonas sp. gnum-1 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Alteromonas sp. tmed35 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Aurantimonas Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1080/01490450902724840 UNKNOWN
Aurantimonas manganoxydans si85-9a1 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Coccolithus braarudii Bacteria Pseudomonadota NCBI 0   UNKNOWN
Colwellia maris Bacteria Pseudomonadota NCBI 0   UNKNOWN
Colwellia psychrerythraea 34h Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Congregibacter litoralis kt71 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Dinoroseobacter shibae dfl 12 = dsm 16493 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Ectothiorhodospira Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Ectothiorhodospira sp. phs-1 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Erythrobacter litoralis htcc2594 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Erythrobacter sp. Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1099/ijsem.0.003136 UNKNOWN
Erythrobacter sp. nap1 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Erythrobacter sp. sd-21 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Fulvimarina pelagi htcc2506 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Fulvimarina sp Bacteria Pseudomonadota NCBI 0   UNKNOWN
Gamma proteobacterium 'hot 75m4' Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Gamma proteobacterium htcc2207 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Gammaproteobacteria Bacteria Pseudomonadota Wikipedia 1 2018 UNKNOWN
Gammaproteobacteria bacterium Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Glaciecola punicea acam 611 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Hahella chejuensis kctc 2396 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Halomonas maris Bacteria Pseudomonadota NCBI 0   UNKNOWN
Halomonas sp. htnk1 Bacteria Pseudomonadota NCBI     UNKNOWN
Halomonas titanicae Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1099/ijs.0.020628-0 UNKNOWN
Hoeflea sp. ec-hk425 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Hydrogenovibrio crunogenus Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1128/jb.187.16.5761-5766.2005 UNKNOWN
Hydrogenovibrio thermophilus Bacteria Pseudomonadota NCBI 1 https://doi.org/10.3389/fmicb.2017.02513 UNKNOWN
Hyphomonas hirschiana vp5 Bacteria Pseudomonadota NCBI 1 https://gold.jgi.doe.gov/organism?id=Go0035296 UNKNOWN
Hyphomonas neptunium atcc 15444 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Hyphomonas pacifica Bacteria Pseudomonadota NCBI 1 https://doi.org/10.1007/s10482-016-0712-7 UNKNOWN
Hyphomonas polymorpha ps728 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Idiomarina loihiensis l2tr Bacteria Pseudomonadota Wikipedia 1 2018 UNKNOWN
Idiomarina sp Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Idiomarina sp. Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Idiomarina sp. h2 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Idiomarina sp. md25a Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Jannaschia Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Jannaschia sp. Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Jannaschia sp. ccs1 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Leptothrix sp. (in: bacteria) Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Lysobacter maris Bacteria Pseudomonadota NCBI 0   UNKNOWN
Magnetococcus Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Magnetococcus marinus mc-1 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Marine gamma proteobacterium htcc2080 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Marine gamma proteobacterium htcc2143 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Marinobacter adhaerens Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Marinobacter adhaerens hp15 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Marinobacter confluentis Bacteria Pseudomonadota NCBI 0   UNKNOWN
Marinobacter fuscus Bacteria Pseudomonadota NCBI 0   UNKNOWN
Marinobacter nauticus Bacteria Pseudomonadota NCBI 0   UNKNOWN
Marinobacter salarius Bacteria Pseudomonadota NCBI 0   UNKNOWN
Marinobacter salinexigens Bacteria Pseudomonadota NCBI 1 https://doi.org/10.1099/ijsem.0.004236 UNKNOWN
Marinobacter santoriniensis nksg1 Bacteria Pseudomonadota NCBI 1 https://img.jgi.doe.gov/cgi-bin/m/main.cgi?section=TaxonDetail&page=taxonDetail&taxon_oid=2545824694 UNKNOWN
Marinobacter sp. Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Marinobacter sp. ac-23 Bacteria Pseudomonadota NCBI 1 https://img.jgi.doe.gov/cgi-bin/m/main.cgi?section=TaxonDetail&page=taxonDetail&taxon_oid=2855226351 UNKNOWN
Marinobacter sp. b9-2 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Marinobacter sp. bw6 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Marinobacter sp. c18 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Marinobacter sp. cp1 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Marinobacter sp. dsm 26671 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Marinobacter sp. elb17 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Marinobacter sp. en3 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Marinobacter sp. t13-3 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Marinobacter vinifirmus Bacteria Pseudomonadota NCBI 0   UNKNOWN
Marinobacter vulgaris Bacteria Pseudomonadota NCBI 0   UNKNOWN
Marinomonas Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1007/s10482-014-0213-5 UNKNOWN
Marinomonas gallaica Bacteria Pseudomonadota NCBI     UNKNOWN
Marinomonas profundimaris Bacteria Pseudomonadota NCBI 1 https://doi.org/10.1007/s10482-014-0213-5 UNKNOWN
Marinomonas sp Bacteria Pseudomonadota NCBI 0   UNKNOWN
Marinomonas sp. Bacteria Pseudomonadota NCBI 0   UNKNOWN
Marinomonas sp. c1424 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Marinomonas sp. med121 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN

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CREATE TABLE Marine_Species (
        Species_name TEXT PRIMARY KEY,
        Domain TEXT,
        Phylum TEXT,
        Taxonomic_source TEXT,
        Is_deep_sea INTEGER,
        Deep_sea_source TEXT,
        is_ABNJ_present TEXT
    );
Powered by Datasette · Queries took 13.607ms · Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT