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Marine_Species

Catalogs marine species associated with genetic sequences in the dataset. It includes the species name, taxonomic classification (domain, phylum), and information on whether the species is considered deep-sea.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Species_name
Name of the marine species (Primary Key). Searchable
Domain
Taxonomic domain of the species
Phylum
Taxonomic phylum of the species
Taxonomic_source
Source of the taxonomic classification
Is_deep_sea
Indicates if the species is a deep-sea species (1 for yes, 0 for no)
Deep_sea_source
Source of information on the species' deep-sea status
Is_ABNJ_present
Indicates if the species is present in ABNJ (YES, NO, UNKNOWN)

1,083 rows where Is_ABNJ_present = "UNKNOWN" and is_ABNJ_present = "UNKNOWN"

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Suggested facets: Taxonomic_source

Phylum >30

  • Pseudomonadota 373
  • Proteobacteria 117
  • Euryarchaeota 89
  • Bacteroidota 72
  • Cyanobacteria 60
  • Cyanobacteriota 45
  • Cnidaria 29
  • Bacteroidetes 20
  • Chlorophyta 20
  • Not determined 19
  • Bacillota 16
  • Chordata 14
  • Arthropoda 13
  • Campylobacterota 12
  • Bigyra 10
  • Thermoproteota 10
  • Thermotogota 10
  • Crenarchaeota 9
  • Actinobacteria 8
  • Firmicutes 7
  • Gyrista 7
  • Mollusca 6
  • Myzozoa 6
  • Plancomycetota 6
  • Rhodophyta 6
  • Streptophyta 5
  • Thermotogae 5
  • Uroviricota 5
  • Chlorobi 4
  • Chlorobiota 4
  • …

Domain 6

  • Bacteria 780
  • Eukaryota 157
  • Archaea 111
  • Nan 19
  • Viruses 15
  • Virus 1

Is_deep_sea 2

  • 0 934
  • 1 145

Is_ABNJ_present 1

  • UNKNOWN · 1,083 ✖
Species_name ▼ Domain Phylum Taxonomic_source Is_deep_sea Deep_sea_source is_ABNJ_present
Acaryochloris Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Acaryochloris marina Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Acaryochloris marina mbic11017 Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Acropora Eukaryota Cnidaria NCBI 0 0 UNKNOWN
Acropora formosa Eukaryota Cnidaria WoRMS 0 0 UNKNOWN
Aequorea Eukaryota Cnidaria NCBI 0 0 UNKNOWN
Aequorivita antarctica Bacteria Bacteroidetes WoRMS 0   UNKNOWN
Aeromicrobium marinum dsm 15272 Bacteria Actynomycetota NCBI 0   UNKNOWN
Aeromonas molluscorum 848 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Aeromonas salmonicida Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Aeromonas salmonicida subsp. salmonicida Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Aeromonas salmonicida subsp. salmonicida a449 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Aeropyrum camini sy1 = jcm 12091 Archaea Thermoproteota NCBI 1 https://img.jgi.doe.gov/cgi-bin/m/main.cgi?section=TaxonDetail&page=taxonDetail&taxon_oid=2675903482 UNKNOWN
Aeropyrum pernix Archaea Crenarchaeota WoRMS 1 2018 UNKNOWN
Aeropyrum pernix k1 Archaea Thermoproteota Wikipedia 1 2018 UNKNOWN
Alcanivorax Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1099/ijs.0.049957-0 UNKNOWN
Alcanivorax borkumensis sk2 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Alcanivorax hongdengensis Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Alcanivorax nanhaiticus Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax pacificus Bacteria Pseudomonadota Wikipedia 1 2018 UNKNOWN
Alcanivorax sp Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. dg881 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. k Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. k2-1 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. k3-3 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. nbrc 101096 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. nbrc 102022 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. nbrc 102027 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. st-ta Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. vbw004 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. z Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alexandrium Eukaryota Myzozoa WoRMS 0 0 UNKNOWN
Alexandrium fundyense Eukaryota Dinoflagellata Wikipedia 0 0 UNKNOWN
Algibacter aquaticus Bacteria Bacteroidota NCBI 0   UNKNOWN
Algibacter marinivivus Bacteria Bacteroidota NCBI 0   UNKNOWN
Aliivibrio fischeri es114 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Aliivibrio logei Bacteria Proteobacteria WoRMS 0   UNKNOWN
Aliivibrio salmonicida lfi1238 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Aliivibrio wodanis Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Alteromonas aestuariivivens Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alteromonas australica Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alteromonas macleodii atcc 27126 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Alteromonas mediterranea Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alteromonas mediterranea de Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1007/s10482-014-0309-y UNKNOWN
Alteromonas sp. Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1007/s00203-022-02908-8 UNKNOWN
Alteromonas sp. gnum-1 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Alteromonas sp. tmed35 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alvikia littoralis Eukaryota Chlorophyta NCBI 0 0 UNKNOWN
Alvinella pompejana epibiont 6c6 Bacteria Proteobacteria NCBI 1 2018 UNKNOWN
Anabaena cylindrica Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Anabaena cylindrica pcc 7122 Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Anabaena laxa Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Anabaena sp Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Anabaena sp. al09 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Anabaena sp. ch1 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Anabaena sp. pcc 7108 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Anabaena sp. ybs01 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Anemonia Eukaryota Cnidaria NCBI 0 0 UNKNOWN
Anthoathecata Eukaryota Cnidaria NCBI 0 0 UNKNOWN
Anthopleura Eukaryota Cnidaria NCBI 0 0 UNKNOWN
Anthozoa Eukaryota Cnidaria NCBI 0 0 UNKNOWN
Aplysia Eukaryota Mollusca NCBI 0 0 UNKNOWN
Aquifex aeolicus Bacteria Aquificota Wikipedia 0   UNKNOWN
Aquifex pyrophilus Bacteria Aquificae WoRMS 1 2018 UNKNOWN
Aquimarina macrocephali Bacteria Bacteroidetes WoRMS 0 0 UNKNOWN
Archaeoglobus fulgidus Archaea Euryarchaeota WoRMS 1 2018 UNKNOWN
Archaeoglobus fulgidus dsm 4304 Archaea Euryarchaeota Wikipedia 1 2018 UNKNOWN
Archaeoglobus lithotrophicus Archaea Euryarchaeota WoRMS 1 2018 UNKNOWN
Archaeoglobus profundus Archaea Euryarchaeota WoRMS 1 2018 UNKNOWN
Archaeoglobus veneficus Archaea Euryarchaeota WoRMS 1 2018 UNKNOWN
Arenibacter echinorum Bacteria Bacteroidetes WoRMS 0   UNKNOWN
Arenimonas sp Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Artemia franciscana Eukaryota Arthropoda NCBI 0 0 UNKNOWN
Arthrospira platensis c1 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Arthrospira platensis fachb-341 Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Arthrospira platensis kmmcc cy-007 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Arthrospira platensis nies-39 Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Arthrospira sp. srm16 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Ascidia sydneiensis samea Eukaryota Chordata NCBI 0 0 UNKNOWN
Aurantimonas Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1080/01490450902724840 UNKNOWN
Aurantimonas manganoxydans Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Aurantimonas manganoxydans si85-9a1 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Aureispira marina Bacteria Bacteroidetes WoRMS 0 0 UNKNOWN
Bacillus altitudinis Bacteria Bacillota NCBI 0   UNKNOWN
Bacillus tropicus Bacteria Bacillota NCBI 0   UNKNOWN
Bacillus xiamenensis Bacteria Bacillota NCBI 0   UNKNOWN
Balaenoptera acutorostrata scammoni Eukaryota Chordata NCBI 0 0 UNKNOWN
Belliella Bacteria Bacteroidota Wikipedia 0 0 UNKNOWN
Belliella baltica Bacteria Bacteroidetes WoRMS 0   UNKNOWN
Bizionia algoritergicola Bacteria Bacteroidetes WoRMS 0   UNKNOWN
Blastopirellula marina dsm 3645 Bacteria Planctomycetota Wikipedia 0 0 UNKNOWN
Branchiostoma belcheri tsingtauense Eukaryota Chordata NCBI 0 0 UNKNOWN
Bruguiera gymnorhiza Eukaryota Tracheophyta WoRMS 0 0 UNKNOWN
Bruguiera x rhynchopetala Eukaryota Streptophyta NCBI 0   UNKNOWN
Caldithrix abyssi dsm 13497 Bacteria Calditrichota NCBI 1 WoRDSS UNKNOWN
Caldithrix sp Bacteria Calditrichota NCBI 0   UNKNOWN
Calditrix abyssi Bacteria Calditrichaeota NCBI 1 https://doi.org/10.1099/ijs.0.02390-0 UNKNOWN
Caligus rogercresseyi Eukaryota Arthropoda WoRMS 0 0 UNKNOWN
Calothrix sp. Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Caminibacter hydrogeniphilus Bacteria Proteobacteria WoRMS 1 2018 UNKNOWN

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CREATE TABLE Marine_Species (
        Species_name TEXT PRIMARY KEY,
        Domain TEXT,
        Phylum TEXT,
        Taxonomic_source TEXT,
        Is_deep_sea INTEGER,
        Deep_sea_source TEXT,
        is_ABNJ_present TEXT
    );
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