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Marine_Species

Catalogs marine species associated with genetic sequences in the dataset. It includes the species name, taxonomic classification (domain, phylum), and information on whether the species is considered deep-sea.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Species_name
Name of the marine species (Primary Key). Searchable
Domain
Taxonomic domain of the species
Phylum
Taxonomic phylum of the species
Taxonomic_source
Source of the taxonomic classification
Is_deep_sea
Indicates if the species is a deep-sea species (1 for yes, 0 for no)
Deep_sea_source
Source of information on the species' deep-sea status
Is_ABNJ_present
Indicates if the species is present in ABNJ (YES, NO, UNKNOWN)

152 rows where Is_deep_sea = 0, Phylum = "Pseudomonadota" and Taxonomic_source = "NCBI"

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Phylum 1

  • Pseudomonadota · 152 ✖

Is_deep_sea 1

  • - · 152 ✖

Is_ABNJ_present 1

  • UNKNOWN 152

Domain 1

  • Bacteria 152
Species_name ▼ Domain Phylum Taxonomic_source Is_deep_sea Deep_sea_source is_ABNJ_present
Coccolithus braarudii Bacteria Pseudomonadota NCBI 0   UNKNOWN
Colwellia maris Bacteria Pseudomonadota NCBI 0   UNKNOWN
Ectothiorhodospira sp. phs-1 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Fulvimarina pelagi htcc2506 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Fulvimarina sp Bacteria Pseudomonadota NCBI 0   UNKNOWN
Glaciecola punicea acam 611 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Halomonas maris Bacteria Pseudomonadota NCBI 0   UNKNOWN
Hoeflea sp. ec-hk425 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Hyphomonas polymorpha ps728 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Lysobacter maris Bacteria Pseudomonadota NCBI 0   UNKNOWN
Marinobacter confluentis Bacteria Pseudomonadota NCBI 0   UNKNOWN
Marinobacter fuscus Bacteria Pseudomonadota NCBI 0   UNKNOWN
Marinobacter nauticus Bacteria Pseudomonadota NCBI 0   UNKNOWN
Marinobacter salarius Bacteria Pseudomonadota NCBI 0   UNKNOWN
Marinobacter sp. b9-2 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Marinobacter sp. bw6 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Marinobacter sp. c18 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Marinobacter sp. cp1 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Marinobacter sp. dsm 26671 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Marinobacter sp. en3 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Marinobacter sp. t13-3 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Marinobacter vinifirmus Bacteria Pseudomonadota NCBI 0   UNKNOWN
Marinobacter vulgaris Bacteria Pseudomonadota NCBI 0   UNKNOWN
Marinomonas sp Bacteria Pseudomonadota NCBI 0   UNKNOWN
Marinomonas sp. Bacteria Pseudomonadota NCBI 0   UNKNOWN
Marinomonas sp. c1424 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Marinomonas spartinae Bacteria Pseudomonadota NCBI 0   UNKNOWN
Marinomonas ushuaiensis dsm 15871 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Maritimibacter sp Bacteria Pseudomonadota NCBI 0   UNKNOWN
Methylophaga aminisulfidivorans mp Bacteria Pseudomonadota NCBI 0   UNKNOWN
Methylophaga frappieri Bacteria Pseudomonadota NCBI 0   UNKNOWN
Methylophaga nitratireducenticrescens Bacteria Pseudomonadota NCBI 0   UNKNOWN
Methylophaga thiooxydans dms010 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Moritella sp Bacteria Pseudomonadota NCBI 0   UNKNOWN
Moritella sp. Bacteria Pseudomonadota NCBI 0   UNKNOWN
Neptuniibacter sp. phe_28 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Nitratireductor aestuarii Bacteria Pseudomonadota NCBI 0   UNKNOWN
Nitratireductor sp Bacteria Pseudomonadota NCBI 0   UNKNOWN
Nitratireductor sp. stc3 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Nitrosococcus halophilus Bacteria Pseudomonadota NCBI 0   UNKNOWN
Nitrosococcus oceani c-27 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Octadecabacter arcticus 238 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Photobacterium aphoticum Bacteria Pseudomonadota NCBI 0   UNKNOWN
Photobacterium chitinilyticum Bacteria Pseudomonadota NCBI 0   UNKNOWN
Photobacterium damselae subsp. damselae Bacteria Pseudomonadota NCBI 0   UNKNOWN
Photobacterium galatheae Bacteria Pseudomonadota NCBI 0   UNKNOWN
Photobacterium leiognathi subsp. mandapamensis Bacteria Pseudomonadota NCBI 0   UNKNOWN
Photobacterium piscicola Bacteria Pseudomonadota NCBI 0   UNKNOWN
Photobacterium sanguinicancri Bacteria Pseudomonadota NCBI 0   UNKNOWN
Photobacterium sp. gb-1 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Photobacterium sp. jt-ish-224 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Photobacterium sp. ma1-3 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Pseudoalteromonas sp. nzs100_1 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Pseudoalteromonas sp. nzs11_1 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Pseudooceanicola lipolyticus Bacteria Pseudomonadota NCBI 0   UNKNOWN
Pseudovibrio sp. ad26 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Psychrobacter sp. c 20.9 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Psychrobacter sp. choline-02u-9 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Psychrobacter sp. cmf 22.2 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Psychrobacter sp. d2 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Psychrobacter sp. dab_al43b Bacteria Pseudomonadota NCBI 0   UNKNOWN
Psychrobacter sp. g Bacteria Pseudomonadota NCBI 0   UNKNOWN
Psychrobacter sp. jcm 18903 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Psychrobacter sp. mes7-p7e Bacteria Pseudomonadota NCBI 0   UNKNOWN
Psychrobacter sp. p11g5 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Psychrobacter sp. sarcosine-02u-2 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Psychrobacter sp. sarcosine-3u-12 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Psychromonas sp. b3m02 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Reinekea blandensis med297 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Roseobacter sp. medpe-sw Bacteria Pseudomonadota NCBI 0   UNKNOWN
Roseovarius aestuarii Bacteria Pseudomonadota NCBI 0   UNKNOWN
Roseovarius litoreus Bacteria Pseudomonadota NCBI 0   UNKNOWN
Roseovarius sp. brh_c41 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Roseovarius tolerans Bacteria Pseudomonadota NCBI 0   UNKNOWN
Saccharophagus sp. ag21 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Shewanella baltica ba175 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Shewanella chilikensis Bacteria Pseudomonadota NCBI 0   UNKNOWN
Shewanella decolorationis Bacteria Pseudomonadota NCBI 0   UNKNOWN
Shewanella decolorationis s12 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Shewanella fodinae Bacteria Pseudomonadota NCBI 0   UNKNOWN
Shewanella seohaensis Bacteria Pseudomonadota NCBI 0   UNKNOWN
Shewanella sp. 10n.286.48.b5 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Shewanella sp. 10n.286.51.b7 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Shewanella sp. ac10 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Shewanella sp. cg12_big_fil_rev_8_21_14_0_65_47_15 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Shewanella sp. cp20 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Shewanella sp. jne2 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Shewanella sp. lc6 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Shewanella sp. p1-14-1 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Shewanella sp. sg41-4 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Shewanella sp. sg44-2 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Shewanella sp. sg44-6 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Shewanella sp. sib1 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Shewanella sp. snu wt4 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Sulfitobacter donghicola dsw-25 = kctc 12864 = jcm 14565 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Sulfitobacter sp. cb-a Bacteria Pseudomonadota NCBI 0   UNKNOWN
Sulfitobacter sp. d7 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Sulfitobacter sp. ehc04 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Sulfitobacter sp. sk025 Bacteria Pseudomonadota NCBI 0   UNKNOWN
Thalassospira alkalitolerans Bacteria Pseudomonadota NCBI 0   UNKNOWN

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CREATE TABLE Marine_Species (
        Species_name TEXT PRIMARY KEY,
        Domain TEXT,
        Phylum TEXT,
        Taxonomic_source TEXT,
        Is_deep_sea INTEGER,
        Deep_sea_source TEXT,
        is_ABNJ_present TEXT
    );
Powered by Datasette · Queries took 12.217ms · Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT