Marine_Species

Catalogs marine species associated with genetic sequences in the dataset. It includes the species name, taxonomic classification (domain, phylum), and information on whether the species is considered deep-sea.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Species_name
Name of the marine species (Primary Key). Searchable
Domain
Taxonomic domain of the species
Phylum
Taxonomic phylum of the species
Taxonomic_source
Source of the taxonomic classification
Is_deep_sea
Indicates if the species is a deep-sea species (1 for yes, 0 for no)
Deep_sea_source
Source of information on the species' deep-sea status
Is_ABNJ_present
Indicates if the species is present in ABNJ (YES, NO, UNKNOWN)

1,405 rows where Is_deep_sea = 0

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Domain 6

Is_ABNJ_present 3

Is_deep_sea 1

  • - · 1,305 ✖
Species_name ▼ Domain Phylum Taxonomic_source Is_deep_sea Deep_sea_source is_ABNJ_present
Arenicola marina Eukaryota Annelida WoRMS 0 0 YES
Arenimonas sp Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Argopecten irradians Eukaryota Mollusca WoRMS 0 0 NO
Artemia franciscana Eukaryota Arthropoda NCBI 0 0 UNKNOWN
Artemia salina Eukaryota Arthropoda WoRMS 0   NO
Arthrospira platensis Bacteria Cyanobacteria Wikipedia 0 0 NO
Arthrospira platensis c1 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Arthrospira platensis fachb-341 Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Arthrospira platensis kmmcc cy-007 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Arthrospira platensis nies-39 Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Arthrospira sp. srm16 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Ascidia sydneiensis samea Eukaryota Chordata NCBI 0 0 UNKNOWN
Aspergillus sydowii Eukaryota Ascomycota WoRMS 0 0 NO
Aurantimonas manganoxydans Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Aurantimonas manganoxydans si85-9a1 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Aureispira marina Bacteria Bacteroidetes WoRMS 0 0 UNKNOWN
Aureococcus anophagefferens Eukaryota Ochrophyta WoRMS 0 0 YES
Avicennia marina Eukaryota Tracheophyta WoRMS 0 0 NO
Bacillus altitudinis Bacteria Bacillota NCBI 0   UNKNOWN
Bacillus tropicus Bacteria Bacillota NCBI 0   UNKNOWN
Bacillus xiamenensis Bacteria Bacillota NCBI 0   UNKNOWN
Balaenoptera acutorostrata scammoni Eukaryota Chordata NCBI 0 0 UNKNOWN
Balaenoptera omurai Eukaryota Chordata WoRMS 0   NO
Bankia gouldi Eukaryota Mollusca WoRMS 0 0 NO
Belliella Bacteria Bacteroidota Wikipedia 0 0 UNKNOWN
Belliella baltica Bacteria Bacteroidetes WoRMS 0   UNKNOWN
Benedenia seriolae Eukaryota Platyhelminthes WoRMS 0 0 NO
Bermanella marisrubri Bacteria Proteobacteria WoRMS 0 0 YES
Bigelowiella natans Eukaryota Cercozoa NCBI 0 0 YES
Bizionia algoritergicola Bacteria Bacteroidetes WoRMS 0   UNKNOWN
Bizionia paragorgiae Bacteria Bacteroidetes WoRMS 0   NO
Bizionia saleffrena Bacteria Bacteroidetes WoRMS 0   NO
Blastopirellula marina Bacteria Planctomycetes WoRMS 0 0 YES
Blastopirellula marina dsm 3645 Bacteria Planctomycetota Wikipedia 0 0 UNKNOWN
Bostrychus sinensis Eukaryota Chordata WoRMS 0 0 NO
Botryllus primigenus Eukaryota Chordata WoRMS 0 0 NO
Botryllus schlosseri Eukaryota Chordata WoRMS 0 0 YES
Branchiostoma belcheri Eukaryota Chordata WoRMS 0 0 YES
Branchiostoma belcheri tsingtauense Eukaryota Chordata NCBI 0 0 UNKNOWN
Branchiostoma floridae Eukaryota Chordata WoRMS 0 0 NO
Branchiostoma lanceolatum Eukaryota Chordata WoRMS 0 0 YES
Bruguiera gymnorhiza Eukaryota Tracheophyta WoRMS 0 0 UNKNOWN
Bruguiera sexangula Eukaryota Tracheophyta WoRMS 0 0 NO
Bruguiera x rhynchopetala Eukaryota Streptophyta NCBI 0   UNKNOWN
Bryopsis corticulans Eukaryota Chlorophyta NCBI 0 0 NO
Bryopsis maxima Eukaryota Chlorophyta NCBI 0 0 NO
Bryopsis plumosa Eukaryota Chlorophyta WoRMS 0   YES
Caldithrix sp Bacteria Calditrichota NCBI 0   UNKNOWN
Caligus rogercresseyi Eukaryota Arthropoda WoRMS 0 0 UNKNOWN
Callinectes sapidus Eukaryota Arthropoda WoRMS 0 0 YES
Callorhinchus milii Eukaryota Chordata WoRMS 0 0 YES
Calothrix sp. Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Candidatus endobugula sertula Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Candidatus nitrosopumilus koreensis ar1 Archaea Nitrososphaerota NCBI 0   UNKNOWN
Candidatus pelagibacter Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Candidatus pelagibacter ubique Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Candidatus sulfurimonas baltica Bacteria Campylobacterota NCBI 0   UNKNOWN
Candidatus sulfurimonas marisnigri Bacteria Campylobacterota NCBI 0   UNKNOWN
Carcinoscorpius rotundicauda Eukaryota Arthropoda WoRMS 0 0 NO
Carybdea alata Eukaryota Cnidaria NCBI 0   UNKNOWN
Carybdea rastonii Eukaryota Cnidaria WoRMS 0 0 NO
Caulastraea furcata Eukaryota Cnidaria WoRMS 0 0 NO
Cavernularia obesa Eukaryota Cnidaria WoRMS 0 0 NO
Cellulophaga Bacteria Bacteroidota Wikipedia 0 0 UNKNOWN
Cellulophaga baltica Bacteria Bacteroidetes WoRMS 0   UNKNOWN
Cellulophaga lytica Bacteria Bacteroidetes WoRMS 0 0 YES
Cellulophaga omnivescoria Bacteria Bacteroidota NCBI 0   UNKNOWN
Cenarchaeum symbiosum Archaea Thaumarchaeota WoRMS 0 0 YES
Cenarchaeum symbiosum a Archaea Thermoproteota Wikipedia 0 0 UNKNOWN
Chaetoceros neogracilis Eukaryota Ochrophyta WoRMS 0 0 YES
Chelonia mydas Eukaryota Chordata WoRMS 0 0 YES
Chiloscyllium punctatum Eukaryota Chordata WoRMS 0   NO
Chimaera sp. Bacteria Actinomycetota Wikipedia 0 0 UNKNOWN
Chlamys nipponensis akazara Eukaryota Mollusca NCBI 0   UNKNOWN
Chlorarachnion Eukaryota Cercozoa NCBI 0 0 UNKNOWN
Chlorobium phaeobacteroides Bacteria Chlorobiota Wikipedia 0 0 UNKNOWN
Chlorobium phaeobacteroides bs1 Bacteria Chlorobiota Wikipedia 0 0 UNKNOWN
Chlorobium phaeovibrioides Bacteria Chlorobi WoRMS 0   UNKNOWN
Chloroherpeton thalassium Bacteria Chlorobi WoRMS 0 0 YES
Chloroherpeton thalassium atcc 35110 Bacteria Chlorobi NCBI 0 0 UNKNOWN
Chloromonas sp. knf032 Eukaryota Chlorophyta NCBI 0 0 UNKNOWN
Chondrus crispus Eukaryota Rhodophyta NCBI 0 0 NO
Chryseobacterium aquaticum subsp. greenlandense Bacteria Bacteroidota NCBI 0   UNKNOWN
Ciona intestinalis Eukaryota Chordata WoRMS 0 0 YES
Ciona savignyi Eukaryota Chordata WoRMS 0 0 NO
Clavularia sp. Eukaryota Cnidaria NCBI 0 0 UNKNOWN
Clytia gregaria Eukaryota Cnidaria WoRMS 0 0 NO
Coccolithus braarudii Bacteria Pseudomonadota NCBI 0   UNKNOWN
Codium barbatum Eukaryota Chlorophyta NCBI 0 0 NO
Codium fragile Eukaryota Chlorophyta NCBI 0 0 NO
Codium latum Eukaryota Chlorophyta NCBI 0 0 NO
Coleofasciculus chthonoplastes Bacteria Cyanobacteria NCBI 0 0 NO
Coleofasciculus chthonoplastes pcc 7420 Bacteria Cyanobacteria NCBI 0 0 UNKNOWN
Colwellia chukchiensis Bacteria Proteobacteria WoRMS 0   UNKNOWN
Colwellia demingiae Bacteria Proteobacteria WoRMS 0   UNKNOWN
Colwellia maris Bacteria Pseudomonadota NCBI 0   UNKNOWN
Colwellia psychrerythraea Bacteria Proteobacteria WoRMS 0 0 YES
Colwellia psychrerythraea 34h Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Condylactis gigantea Eukaryota Cnidaria WoRMS 0 0 NO
Congregibacter litoralis Bacteria Proteobacteria WoRMS 0 0 NO

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CREATE TABLE Marine_Species (
        Species_name TEXT PRIMARY KEY,
        Domain TEXT,
        Phylum TEXT,
        Taxonomic_source TEXT,
        Is_deep_sea INTEGER,
        Deep_sea_source TEXT,
        is_ABNJ_present TEXT
    );