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Marine_Species

Catalogs marine species associated with genetic sequences in the dataset. It includes the species name, taxonomic classification (domain, phylum), and information on whether the species is considered deep-sea.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Species_name
Name of the marine species (Primary Key). Searchable
Domain
Taxonomic domain of the species
Phylum
Taxonomic phylum of the species
Taxonomic_source
Source of the taxonomic classification
Is_deep_sea
Indicates if the species is a deep-sea species (1 for yes, 0 for no)
Deep_sea_source
Source of information on the species' deep-sea status
Is_ABNJ_present
Indicates if the species is present in ABNJ (YES, NO, UNKNOWN)

40 rows where Phylum = "Bacteroidota" and Taxonomic_source = "NCBI"

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Suggested facets: Deep_sea_source

Is_deep_sea 2

  • 0 37
  • 1 3

Phylum 1

  • Bacteroidota · 40 ✖

Is_ABNJ_present 1

  • UNKNOWN 40

Domain 1

  • Bacteria 40
Species_name ▼ Domain Phylum Taxonomic_source Is_deep_sea Deep_sea_source is_ABNJ_present
Algibacter aquaticus Bacteria Bacteroidota NCBI 0   UNKNOWN
Algibacter marinivivus Bacteria Bacteroidota NCBI 0   UNKNOWN
Cellulophaga omnivescoria Bacteria Bacteroidota NCBI 0   UNKNOWN
Chryseobacterium aquaticum subsp. greenlandense Bacteria Bacteroidota NCBI 0   UNKNOWN
Dokdonia donghaensis dsw-1 Bacteria Bacteroidota NCBI 0   UNKNOWN
Flavivirga rizhaonensis Bacteria Bacteroidota NCBI 0   UNKNOWN
Flavobacteria bacterium bbfl7 Bacteria Bacteroidota NCBI 0 0 UNKNOWN
Flavobacteriaceae bacterium Bacteria Bacteroidota NCBI 0   UNKNOWN
Flavobacteriales bacterium Bacteria Bacteroidota NCBI 0   UNKNOWN
Flavobacteriales bacterium brh_c54 Bacteria Bacteroidota NCBI 0   UNKNOWN
Flavobacterium aquatile Bacteria Bacteroidota NCBI 0   UNKNOWN
Flavobacterium branchiophilum Bacteria Bacteroidota NCBI 0   UNKNOWN
Flavobacterium crassostreae Bacteria Bacteroidota NCBI 0   UNKNOWN
Flavobacterium psychrophilum Bacteria Bacteroidota NCBI 0   UNKNOWN
Flavobacterium sp. tab 87 Bacteria Bacteroidota NCBI 0   UNKNOWN
Flavobacterium sp. umi-01 Bacteria Bacteroidota NCBI 0   UNKNOWN
Kordia sp. tara_039_srf Bacteria Bacteroidota NCBI 0   UNKNOWN
Maribacter hydrothermalis Bacteria Bacteroidota NCBI 1 https://doi.org/10.1007/s00284-021-02519-4 UNKNOWN
Microscilla marina atcc 23134 Bacteria Bacteroidota NCBI 0   UNKNOWN
Microscilla sp. pre1 Bacteria Bacteroidota NCBI 0   UNKNOWN
Patiriisocius marinus Bacteria Bacteroidota NCBI 0   UNKNOWN
Polaribacter atrinae Bacteria Bacteroidota NCBI 0   UNKNOWN
Polaribacter dokdonensis dsw-5 Bacteria Bacteroidota NCBI 0   UNKNOWN
Polaribacter haliotis Bacteria Bacteroidota NCBI 0   UNKNOWN
Polaribacter pacificus Bacteria Bacteroidota NCBI 1 https://doi.org/10.1099/ijsem.0.002082 UNKNOWN
Polaribacter sp. ald11 Bacteria Bacteroidota NCBI 0   UNKNOWN
Polaribacter sp. bacl8 mag-120531-bin13 Bacteria Bacteroidota NCBI 0   UNKNOWN
Polaribacter sp. bm10 Bacteria Bacteroidota NCBI 0   UNKNOWN
Polaribacter sp. kt25b Bacteria Bacteroidota NCBI 0   UNKNOWN
Polaribacter vadi Bacteria Bacteroidota NCBI 0   UNKNOWN
Psychroflexus salarius Bacteria Bacteroidota NCBI 1 https://gold.jgi.doe.gov/organism?id=Go0143309 UNKNOWN
Psychroserpens sp. njdz02 Bacteria Bacteroidota NCBI 0   UNKNOWN
Rhodothermus marinus dsm 4252 Bacteria Bacteroidota NCBI 0 0 UNKNOWN
Tenacibaculum finnmarkense Bacteria Bacteroidota NCBI 0   UNKNOWN
Tenacibaculum jejuense Bacteria Bacteroidota NCBI 0   UNKNOWN
Tenacibaculum maritimum ncimb 2154 Bacteria Bacteroidota NCBI 0   UNKNOWN
Tenacibaculum sp. 20j Bacteria Bacteroidota NCBI 0   UNKNOWN
Urechidicola croceus Bacteria Bacteroidota NCBI 0   UNKNOWN
Winogradskyella sediminis Bacteria Bacteroidota NCBI 0   UNKNOWN
Winogradskyella sp. kyw1333 Bacteria Bacteroidota NCBI 0   UNKNOWN

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CREATE TABLE Marine_Species (
        Species_name TEXT PRIMARY KEY,
        Domain TEXT,
        Phylum TEXT,
        Taxonomic_source TEXT,
        Is_deep_sea INTEGER,
        Deep_sea_source TEXT,
        is_ABNJ_present TEXT
    );
Powered by Datasette · Queries took 14.43ms · Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT