Marine_Species

Catalogs marine species associated with genetic sequences in the dataset. It includes the species name, taxonomic classification (domain, phylum), and information on whether the species is considered deep-sea.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Species_name
Name of the marine species (Primary Key). Searchable
Domain
Taxonomic domain of the species
Phylum
Taxonomic phylum of the species
Taxonomic_source
Source of the taxonomic classification
Is_deep_sea
Indicates if the species is a deep-sea species (1 for yes, 0 for no)
Deep_sea_source
Source of information on the species' deep-sea status
Is_ABNJ_present
Indicates if the species is present in ABNJ (YES, NO, UNKNOWN)

425 rows where Taxonomic_source = "Wikipedia"

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Suggested facets: Deep_sea_source, is_ABNJ_present

Domain 5

Is_ABNJ_present 3

Is_deep_sea 2

  • 0 361
  • 1 63
Species_name ▼ Domain Phylum Taxonomic_source Is_deep_sea Deep_sea_source is_ABNJ_present
Acaryochloris Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Acaryochloris marina Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Acaryochloris marina mbic11017 Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Aeromonas molluscorum 848 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Aeromonas salmonicida subsp. salmonicida Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Aeromonas salmonicida subsp. salmonicida a449 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Aeropyrum pernix k1 Archaea Thermoproteota Wikipedia 1 2018 UNKNOWN
Alcanivorax Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1099/ijs.0.049957-0 UNKNOWN
Alcanivorax borkumensis sk2 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Alcanivorax nanhaiticus Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax pacificus Bacteria Pseudomonadota Wikipedia 1 2018 UNKNOWN
Alcanivorax sp Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. dg881 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. k Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. k2-1 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. k3-3 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. nbrc 101096 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. nbrc 102022 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. nbrc 102027 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. st-ta Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. vbw004 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. z Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alexandrium fundyense Eukaryota Dinoflagellata Wikipedia 0 0 UNKNOWN
Alexandrium pacificum Eukaryota Myzozoa Wikipedia 0   NO
Aliivibrio fischeri es114 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Aliivibrio salmonicida lfi1238 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Alteromonas aestuariivivens Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alteromonas australica Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alteromonas macleodii atcc 27126 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Alteromonas mediterranea Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alteromonas mediterranea de Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1007/s10482-014-0309-y UNKNOWN
Alteromonas sp. Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1007/s00203-022-02908-8 UNKNOWN
Alteromonas sp. gnum-1 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Alteromonas sp. tmed35 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Anabaena cylindrica Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Anabaena cylindrica pcc 7122 Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Anabaena laxa Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Anabaena sp Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Anabaena sp. al09 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Anabaena sp. ch1 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Anabaena sp. pcc 7108 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Anabaena sp. ybs01 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Aquifex aeolicus Bacteria Aquificota Wikipedia 0   UNKNOWN
Archaeoglobus fulgidus dsm 4304 Archaea Euryarchaeota Wikipedia 1 2018 UNKNOWN
Arenimonas sp Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Arthrospira platensis Bacteria Cyanobacteria Wikipedia 0 0 NO
Arthrospira platensis c1 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Arthrospira platensis fachb-341 Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Arthrospira platensis kmmcc cy-007 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Arthrospira platensis nies-39 Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Arthrospira sp. srm16 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Aurantimonas Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1080/01490450902724840 UNKNOWN
Aurantimonas manganoxydans si85-9a1 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Belliella Bacteria Bacteroidota Wikipedia 0 0 UNKNOWN
Blastopirellula marina dsm 3645 Bacteria Planctomycetota Wikipedia 0 0 UNKNOWN
Calothrix sp. Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Caminibacter mediatlanticus tb-2 Bacteria Campylobacterota Wikipedia 1 2018 UNKNOWN
Cellulophaga Bacteria Bacteroidota Wikipedia 0 0 UNKNOWN
Cenarchaeum symbiosum a Archaea Thermoproteota Wikipedia 0 0 UNKNOWN
Chimaera sp. Bacteria Actinomycetota Wikipedia 0 0 UNKNOWN
Chlorobium phaeobacteroides Bacteria Chlorobiota Wikipedia 0 0 UNKNOWN
Chlorobium phaeobacteroides bs1 Bacteria Chlorobiota Wikipedia 0 0 UNKNOWN
Colwellia psychrerythraea 34h Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Congregibacter litoralis kt71 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Crassostrea ariakensis Eukaryota Mollusca Wikipedia 0   UNKNOWN
Crenarchaeota Archaea Thermoproteota Wikipedia 0 0 UNKNOWN
Croceibacter atlanticus htcc2559 Bacteria Bacteroidota Wikipedia 0 0 UNKNOWN
Crocosphaera watsonii Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Crocosphaera watsonii wh 8501 Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Cyanothece Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Cyanothece sp. pcc 7425 Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Denitrovibrio acetiphilus dsm 12809 Bacteria Deferribacterota Wikipedia 0 0 UNKNOWN
Desulfobacter curvatus Bacteria Thermodesulfobacteriota Wikipedia 0 0 UNKNOWN
Desulfurococcus amylolyticus Archaea Thermoproteota Wikipedia 0 0 UNKNOWN
Desulfurococcus sp. Archaea Thermoproteota Wikipedia 0 0 UNKNOWN
Dinoroseobacter shibae dfl 12 = dsm 16493 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Dokdonia sp. med134 Bacteria Bacteroidota Wikipedia 0 0 UNKNOWN
Ectothiorhodospira Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Erythrobacter litoralis htcc2594 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Erythrobacter sp. Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1099/ijsem.0.003136 UNKNOWN
Erythrobacter sp. nap1 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Erythrobacter sp. sd-21 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Eutreptiella braarudii Eukaryota Euglenozoa Wikipedia 0 0 YES
Eutreptiella gymnastica Eukaryota Euglenozoa Wikipedia 0 0 YES
Eutreptiella pomquetensis Eukaryota Euglenozoa Wikipedia 0 0 YES
Flavobacteriales Bacteria Bacteroidota Wikipedia 0 0 UNKNOWN
Flavobacteriales bacterium alc-1 Bacteria Bacteroidota Wikipedia 0 0 UNKNOWN
Gamma proteobacterium 'hot 75m4' Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Gamma proteobacterium htcc2207 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Gammaproteobacteria Bacteria Pseudomonadota Wikipedia 1 2018 UNKNOWN
Gammaproteobacteria bacterium Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Geobacillus kaustophilus hta426 Bacteria Bacillota Wikipedia 1 2018 UNKNOWN
Gramella forsetii kt0803 Bacteria Bacteroidota Wikipedia 0 0 UNKNOWN
Hahella chejuensis kctc 2396 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Halomonas titanicae Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1099/ijs.0.020628-0 UNKNOWN
Hemiselmis rufescens Eukaryota Cryptophyta Wikipedia 0 0 NO
Hemiselmis virescens Eukaryota Cryptophyta Wikipedia 0 0 NO
Hydrogenovibrio crunogenus Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1128/jb.187.16.5761-5766.2005 UNKNOWN
Hyperthermus butylicus dsm 5456 Archaea Thermoproteota Wikipedia 0 0 UNKNOWN
Hyphomonas neptunium atcc 15444 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN

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CREATE TABLE Marine_Species (
        Species_name TEXT PRIMARY KEY,
        Domain TEXT,
        Phylum TEXT,
        Taxonomic_source TEXT,
        Is_deep_sea INTEGER,
        Deep_sea_source TEXT,
        is_ABNJ_present TEXT
    );