Marine_Sequences
Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT
- Sequence_accession_number
- Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
- Species_name
- Species associated with the sequence, linking to the Marine Species table. Searchable
- GC_content
- GC content of the sequence
- Sequence_length
- Length of the sequence
- Sequence_status
- Status of the sequence (e.g., confirmed, predicted)
- Is_protein_coding_sequence
- Indicates if the sequence is protein-coding (1 for yes, 0 for no)
- Is_annotated
- Indicates if the sequence has been annotated (1 for yes, 0 for no)
4 rows where Species_name = "Aliivibrio logei"
This data as json, CSV (advanced)
Species_name 1
- Aliivibrio logei · 4 ✖
Sequence_status 1
Is_protein_coding_sequence 1
- 1 4
Is_annotated 1
- 1 4
| Sequence_accession_number ▼ | Species_name | GC_content | Sequence_length | Sequence_status | Is_protein_coding_sequence | Is_annotated |
|---|---|---|---|---|---|---|
| HK190521 | Aliivibrio logei | 44.6593001841621 | 2172.0 | predicted | 1 | 1 |
| HL836987 | Aliivibrio logei | 39.3857271906052 | 1107.0 | predicted | 1 | 1 |
| HL839926 | Aliivibrio logei | 40.5405405405405 | 333.0 | predicted | 1 | 1 |
| HL840484 | Aliivibrio logei | 38.1278538812785 | 438.0 | predicted | 1 | 1 |
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CREATE TABLE Marine_Sequences (
Sequence_accession_number TEXT PRIMARY KEY,
Species_name TEXT,
GC_content TEXT,
Sequence_length TEXT,
Sequence_status TEXT,
Is_protein_coding_sequence INTEGER,
Is_annotated INTEGER,
FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
);