Marine_Sequences
Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT
- Sequence_accession_number
- Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
- Species_name
- Species associated with the sequence, linking to the Marine Species table. Searchable
- GC_content
- GC content of the sequence
- Sequence_length
- Length of the sequence
- Sequence_status
- Status of the sequence (e.g., confirmed, predicted)
- Is_protein_coding_sequence
- Indicates if the sequence is protein-coding (1 for yes, 0 for no)
- Is_annotated
- Indicates if the sequence has been annotated (1 for yes, 0 for no)
136 rows where Is_annotated = 0 and Species_name = "Pyrobaculum aerophilum"
This data as json, CSV (advanced)
Species_name 1
- Pyrobaculum aerophilum · 136 ✖
Sequence_status 1
- observed 136
Is_annotated 1
- - · 136 ✖
Sequence_accession_number ▼ | Species_name | GC_content | Sequence_length | Sequence_status | Is_protein_coding_sequence | Is_annotated |
---|---|---|---|---|---|---|
AX555727 | Pyrobaculum aerophilum | 61.5384615384615 | 26.0 | observed | 0 | 0 |
AX555728 | Pyrobaculum aerophilum | 57.6923076923077 | 26.0 | observed | 0 | 0 |
AX555781 | Pyrobaculum aerophilum | 45.1612903225806 | 31.0 | observed | 0 | 0 |
AX555782 | Pyrobaculum aerophilum | 47.0588235294118 | 34.0 | observed | 0 | 0 |
CS644841 | Pyrobaculum aerophilum | 47.7011494252874 | 174.0 | observed | 1 | 0 |
CS644842 | Pyrobaculum aerophilum | 47.1264367816092 | 174.0 | observed | 1 | 0 |
CS644844 | Pyrobaculum aerophilum | 45.6140350877193 | 171.0 | observed | 1 | 0 |
CS668142 | Pyrobaculum aerophilum | 47.7011494252874 | 174.0 | observed | 1 | 0 |
CS668143 | Pyrobaculum aerophilum | 47.1264367816092 | 174.0 | observed | 1 | 0 |
CS668145 | Pyrobaculum aerophilum | 45.6140350877193 | 171.0 | observed | 1 | 0 |
DD135639 | Pyrobaculum aerophilum | 61.5384615384615 | 26.0 | observed | 0 | 0 |
DD135640 | Pyrobaculum aerophilum | 57.6923076923077 | 26.0 | observed | 0 | 0 |
FB791641 | Pyrobaculum aerophilum | 51.2328767123288 | 1095.0 | observed | 1 | 0 |
FB807804 | Pyrobaculum aerophilum | 47.6874003189793 | 627.0 | observed | 1 | 0 |
FB835453 | Pyrobaculum aerophilum | 47.6874003189793 | 627.0 | observed | 1 | 0 |
FB842854 | Pyrobaculum aerophilum | 47.6874003189793 | 627.0 | observed | 1 | 0 |
FB863515 | Pyrobaculum aerophilum | 47.6874003189793 | 627.0 | observed | 1 | 0 |
FB883092 | Pyrobaculum aerophilum | 47.6874003189793 | 627.0 | observed | 1 | 0 |
FW553257 | Pyrobaculum aerophilum | 55.609756097561 | 615.0 | observed | 1 | 0 |
HB654150 | Pyrobaculum aerophilum | 51.2328767123288 | 1095.0 | observed | 1 | 0 |
HB661700 | Pyrobaculum aerophilum | 51.2328767123288 | 1095.0 | observed | 1 | 0 |
HB663746 | Pyrobaculum aerophilum | 47.6874003189793 | 627.0 | observed | 1 | 0 |
HB677863 | Pyrobaculum aerophilum | 47.6874003189793 | 627.0 | observed | 1 | 0 |
HB705512 | Pyrobaculum aerophilum | 47.6874003189793 | 627.0 | observed | 1 | 0 |
HB712913 | Pyrobaculum aerophilum | 47.6874003189793 | 627.0 | observed | 1 | 0 |
HB733574 | Pyrobaculum aerophilum | 47.6874003189793 | 627.0 | observed | 1 | 0 |
HB753151 | Pyrobaculum aerophilum | 47.6874003189793 | 627.0 | observed | 1 | 0 |
HB884271 | Pyrobaculum aerophilum | 53.574115876599 | 1329.0 | observed | 1 | 0 |
HB888175 | Pyrobaculum aerophilum | 46.4317976513098 | 2214.0 | observed | 1 | 0 |
HB889243 | Pyrobaculum aerophilum | 51.0822510822511 | 693.0 | observed | 1 | 0 |
HB891630 | Pyrobaculum aerophilum | 46.4317976513098 | 2214.0 | observed | 1 | 0 |
HB893908 | Pyrobaculum aerophilum | 46.4317976513098 | 2214.0 | observed | 1 | 0 |
HB895142 | Pyrobaculum aerophilum | 43.125 | 960.0 | observed | 1 | 0 |
HB895144 | Pyrobaculum aerophilum | 51.25 | 960.0 | observed | 1 | 0 |
HB895146 | Pyrobaculum aerophilum | 50.057273768614 | 873.0 | observed | 1 | 0 |
HB899600 | Pyrobaculum aerophilum | 48.2843137254902 | 1224.0 | observed | 1 | 0 |
HB904932 | Pyrobaculum aerophilum | 51.9877675840979 | 327.0 | observed | 1 | 0 |
HB908540 | Pyrobaculum aerophilum | 46.4317976513098 | 2214.0 | observed | 1 | 0 |
HB909521 | Pyrobaculum aerophilum | 51.9877675840979 | 327.0 | observed | 1 | 0 |
HB910092 | Pyrobaculum aerophilum | 46.9858156028369 | 564.0 | observed | 1 | 0 |
HB912560 | Pyrobaculum aerophilum | 59.7130242825607 | 906.0 | observed | 1 | 0 |
HB914070 | Pyrobaculum aerophilum | 43.125 | 960.0 | observed | 1 | 0 |
HB914072 | Pyrobaculum aerophilum | 51.25 | 960.0 | observed | 1 | 0 |
HB914074 | Pyrobaculum aerophilum | 50.057273768614 | 873.0 | observed | 1 | 0 |
HB915015 | Pyrobaculum aerophilum | 46.4317976513098 | 2214.0 | observed | 1 | 0 |
HB915507 | Pyrobaculum aerophilum | 43.125 | 960.0 | observed | 1 | 0 |
HB915509 | Pyrobaculum aerophilum | 51.25 | 960.0 | observed | 1 | 0 |
HB915511 | Pyrobaculum aerophilum | 50.057273768614 | 873.0 | observed | 1 | 0 |
HB916724 | Pyrobaculum aerophilum | 43.125 | 960.0 | observed | 1 | 0 |
HB916726 | Pyrobaculum aerophilum | 51.25 | 960.0 | observed | 1 | 0 |
HB916728 | Pyrobaculum aerophilum | 50.057273768614 | 873.0 | observed | 1 | 0 |
HB923328 | Pyrobaculum aerophilum | 43.125 | 960.0 | observed | 1 | 0 |
HB923330 | Pyrobaculum aerophilum | 51.25 | 960.0 | observed | 1 | 0 |
HB923332 | Pyrobaculum aerophilum | 50.057273768614 | 873.0 | observed | 1 | 0 |
HB927125 | Pyrobaculum aerophilum | 59.7130242825607 | 906.0 | observed | 1 | 0 |
HB927994 | Pyrobaculum aerophilum | 46.4317976513098 | 2214.0 | observed | 1 | 0 |
HB930966 | Pyrobaculum aerophilum | 51.9877675840979 | 327.0 | observed | 1 | 0 |
HB932216 | Pyrobaculum aerophilum | 46.9858156028369 | 564.0 | observed | 1 | 0 |
HB939406 | Pyrobaculum aerophilum | 46.4317976513098 | 2214.0 | observed | 1 | 0 |
HB944472 | Pyrobaculum aerophilum | 56.020942408377 | 573.0 | observed | 1 | 0 |
HB948995 | Pyrobaculum aerophilum | 46.9858156028369 | 564.0 | observed | 1 | 0 |
HB953726 | Pyrobaculum aerophilum | 46.9858156028369 | 564.0 | observed | 1 | 0 |
HB955048 | Pyrobaculum aerophilum | 59.7130242825607 | 906.0 | observed | 1 | 0 |
HB955704 | Pyrobaculum aerophilum | 52.7593818984547 | 906.0 | observed | 1 | 0 |
HB957057 | Pyrobaculum aerophilum | 46.9858156028369 | 564.0 | observed | 1 | 0 |
HB958931 | Pyrobaculum aerophilum | 59.7130242825607 | 906.0 | observed | 1 | 0 |
HB968599 | Pyrobaculum aerophilum | 54.2458808618504 | 789.0 | observed | 1 | 0 |
HC895163 | Pyrobaculum aerophilum | 54.5454545454545 | 2013.0 | observed | 1 | 0 |
HC895369 | Pyrobaculum aerophilum | 50.3067484662577 | 1956.0 | observed | 1 | 0 |
HC895371 | Pyrobaculum aerophilum | 58.9048378522063 | 1881.0 | observed | 1 | 0 |
HC895373 | Pyrobaculum aerophilum | 44.3181818181818 | 1848.0 | observed | 1 | 0 |
HC899360 | Pyrobaculum aerophilum | 54.688731284476 | 1269.0 | observed | 1 | 0 |
HC900606 | Pyrobaculum aerophilum | 47.921760391198 | 1227.0 | observed | 1 | 0 |
HC901368 | Pyrobaculum aerophilum | 49.0620490620491 | 1386.0 | observed | 1 | 0 |
HC925715 | Pyrobaculum aerophilum | 51.0822510822511 | 693.0 | observed | 1 | 0 |
HC926423 | Pyrobaculum aerophilum | 57.1111111111111 | 900.0 | observed | 1 | 0 |
HC928236 | Pyrobaculum aerophilum | 48.224043715847 | 732.0 | observed | 1 | 0 |
HC938369 | Pyrobaculum aerophilum | 54.1293532338308 | 1005.0 | observed | 1 | 0 |
HC939432 | Pyrobaculum aerophilum | 48.2843137254902 | 1224.0 | observed | 1 | 0 |
HC941680 | Pyrobaculum aerophilum | 53.574115876599 | 1329.0 | observed | 1 | 0 |
HC942060 | Pyrobaculum aerophilum | 46.4317976513098 | 2214.0 | observed | 1 | 0 |
HC943586 | Pyrobaculum aerophilum | 48.5833333333333 | 1200.0 | observed | 1 | 0 |
HC943996 | Pyrobaculum aerophilum | 50.3472222222222 | 1152.0 | observed | 1 | 0 |
HC944794 | Pyrobaculum aerophilum | 50.5836575875486 | 771.0 | observed | 1 | 0 |
HC944796 | Pyrobaculum aerophilum | 50.314465408805 | 795.0 | observed | 1 | 0 |
HC945584 | Pyrobaculum aerophilum | 46.4317976513098 | 2214.0 | observed | 1 | 0 |
HC946652 | Pyrobaculum aerophilum | 51.0822510822511 | 693.0 | observed | 1 | 0 |
HC949039 | Pyrobaculum aerophilum | 46.4317976513098 | 2214.0 | observed | 1 | 0 |
HC949785 | Pyrobaculum aerophilum | 51.9877675840979 | 327.0 | observed | 1 | 0 |
HC951317 | Pyrobaculum aerophilum | 46.4317976513098 | 2214.0 | observed | 1 | 0 |
HC952551 | Pyrobaculum aerophilum | 43.125 | 960.0 | observed | 1 | 0 |
HC952553 | Pyrobaculum aerophilum | 51.25 | 960.0 | observed | 1 | 0 |
HC952555 | Pyrobaculum aerophilum | 50.057273768614 | 873.0 | observed | 1 | 0 |
HC954136 | Pyrobaculum aerophilum | 59.7130242825607 | 906.0 | observed | 1 | 0 |
HC955327 | Pyrobaculum aerophilum | 56.020942408377 | 573.0 | observed | 1 | 0 |
HC956654 | Pyrobaculum aerophilum | 46.9858156028369 | 564.0 | observed | 1 | 0 |
HC957009 | Pyrobaculum aerophilum | 48.2843137254902 | 1224.0 | observed | 1 | 0 |
HC962341 | Pyrobaculum aerophilum | 51.9877675840979 | 327.0 | observed | 1 | 0 |
HC965949 | Pyrobaculum aerophilum | 46.4317976513098 | 2214.0 | observed | 1 | 0 |
HC966930 | Pyrobaculum aerophilum | 51.9877675840979 | 327.0 | observed | 1 | 0 |
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CREATE TABLE Marine_Sequences ( Sequence_accession_number TEXT PRIMARY KEY, Species_name TEXT, GC_content TEXT, Sequence_length TEXT, Sequence_status TEXT, Is_protein_coding_sequence INTEGER, Is_annotated INTEGER, FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name), FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number) );