Marine_Sequences
Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT
- Sequence_accession_number
- Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
- Species_name
- Species associated with the sequence, linking to the Marine Species table. Searchable
- GC_content
- GC content of the sequence
- Sequence_length
- Length of the sequence
- Sequence_status
- Status of the sequence (e.g., confirmed, predicted)
- Is_protein_coding_sequence
- Indicates if the sequence is protein-coding (1 for yes, 0 for no)
- Is_annotated
- Indicates if the sequence has been annotated (1 for yes, 0 for no)
45 rows where Is_annotated = 1, Sequence_length = "720.0" and Sequence_status = "observed"
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These facets timed out: Sequence_status, Is_protein_coding_sequence, Is_annotated, Species_name
Sequence_accession_number ▼ | Species_name | GC_content | Sequence_length | Sequence_status | Is_protein_coding_sequence | Is_annotated |
---|---|---|---|---|---|---|
AX343037 | Aequorea victoria | 61.1111111111111 | 720.0 | observed | 1 | 1 |
AX343039 | Aequorea victoria | 61.1111111111111 | 720.0 | observed | 1 | 1 |
AX815523 | Aequorea victoria | 61.6666666666667 | 720.0 | observed | 1 | 1 |
BD136949 | Aequorea victoria | 62.2222222222222 | 720.0 | observed | 1 | 1 |
CQ881127 | Vibrio cholerae | 39.8611111111111 | 720.0 | observed | 1 | 1 |
CQ896997 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 1 |
CS682457 | Ostreococcus tauri | 57.9166666666667 | 720.0 | observed | 1 | 1 |
DD017653 | Renilla reniformis | 61.5277777777778 | 720.0 | observed | 1 | 1 |
DD055377 | Aequorea victoria | 43.1944444444444 | 720.0 | observed | 1 | 1 |
DD087895 | Aequorea victoria | 62.0833333333333 | 720.0 | observed | 1 | 1 |
DD087896 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 1 |
DD087897 | Aequorea victoria | 61.3888888888889 | 720.0 | observed | 1 | 1 |
DD258990 | Aequorea victoria | 61.9444444444444 | 720.0 | observed | 1 | 1 |
DD400878 | Aequorea victoria | 42.5 | 720.0 | observed | 1 | 1 |
DJ380371 | Aequorea victoria | 61.3888888888889 | 720.0 | observed | 1 | 1 |
DM148078 | Aequorea victoria | 62.0833333333333 | 720.0 | observed | 1 | 1 |
GM957293 | Bermanella marisrubri | 46.6666666666667 | 720.0 | observed | 1 | 1 |
GM958465 | Vibrio cholerae o1 biovar el tor str. n16961 | 52.0833333333333 | 720.0 | observed | 1 | 1 |
GN124713 | Prochlorococcus marinus str. natl1a | 31.8055555555556 | 720.0 | observed | 1 | 1 |
GN124723 | Prochlorococcus marinus str. natl2a | 31.9444444444444 | 720.0 | observed | 1 | 1 |
GN125158 | Erythrobacter sp. nap1 | 58.75 | 720.0 | observed | 1 | 1 |
HB874525 | Vibrio parahaemolyticus | 49.0277777777778 | 720.0 | observed | 1 | 1 |
HB875836 | Shewanella oneidensis | 49.0277777777778 | 720.0 | observed | 1 | 1 |
HB878194 | Rhodopirellula baltica | 56.3888888888889 | 720.0 | observed | 1 | 1 |
HB878384 | Photobacterium profundum | 46.5277777777778 | 720.0 | observed | 1 | 1 |
HB878386 | Photobacterium profundum | 43.4722222222222 | 720.0 | observed | 1 | 1 |
HB907209 | Thiocapsa roseopersicina | 65.2777777777778 | 720.0 | observed | 1 | 1 |
HB907846 | Magnetococcus marinus mc-1 | 49.5833333333333 | 720.0 | observed | 1 | 1 |
HB937666 | Archaeoglobus fulgidus dsm 4304 | 50.9722222222222 | 720.0 | observed | 1 | 1 |
HB961400 | Vibrio cholerae o1 biovar el tor str. n16961 | 51.1111111111111 | 720.0 | observed | 1 | 1 |
HB961508 | Vibrio parahaemolyticus rimd 2210633 | 46.8055555555556 | 720.0 | observed | 1 | 1 |
HB961664 | Aliivibrio fischeri es114 | 43.1944444444444 | 720.0 | observed | 1 | 1 |
HC498205 | Methanococcus maripaludis | 35.2777777777778 | 720.0 | observed | 1 | 1 |
HC498319 | Synechococcus sp. | 59.4444444444444 | 720.0 | observed | 1 | 1 |
HC498323 | Synechococcus sp. | 61.5277777777778 | 720.0 | observed | 1 | 1 |
HC906833 | Prochlorococcus marinus | 30.5555555555556 | 720.0 | observed | 1 | 1 |
HV761149 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 1 |
HW534261 | Aequorea victoria | 38.75 | 720.0 | observed | 1 | 1 |
HW907032 | Vibrio sp. | 38.6111111111111 | 720.0 | observed | 1 | 1 |
JA389482 | Aequorea victoria | 61.6666666666667 | 720.0 | observed | 1 | 1 |
LF707639 | Aequorea victoria | 62.2222222222222 | 720.0 | observed | 1 | 1 |
LF947189 | Aequorea victoria | 61.5277777777778 | 720.0 | observed | 1 | 1 |
LQ980091 | Salmo salar | 60.2777777777778 | 720.0 | observed | 1 | 1 |
MP927451 | Aequorea victoria | 61.6666666666667 | 720.0 | observed | 1 | 1 |
PA543423 | Aequorea victoria | 37.6388888888889 | 720.0 | observed | 1 | 1 |
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CREATE TABLE Marine_Sequences ( Sequence_accession_number TEXT PRIMARY KEY, Species_name TEXT, GC_content TEXT, Sequence_length TEXT, Sequence_status TEXT, Is_protein_coding_sequence INTEGER, Is_annotated INTEGER, FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name), FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number) );