Marine_Sequences
Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT
- Sequence_accession_number
- Unique identifier for the genetic sequence as specified in INSDC databases (Primary Key). Searchable
- Species_name
- Species associated with the sequence, linking to the Marine Species table. Searchable
- GC_content
- GC content of the sequence
- Sequence_length
- Length of the sequence
- Sequence_status
- Status of the sequence (e.g., confirmed, predicted)
- Is_protein_coding_sequence
- Indicates if the sequence is protein-coding (1 for yes, 0 for no)
- Is_annotated
- Indicates if the sequence has been annotated (1 for yes, 0 for no)
22 rows where Is_annotated = 1 and Species_name = "Branchiostoma floridae"
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These facets timed out: Sequence_status
Species_name 1
- Branchiostoma floridae · 22 ✖
Is_protein_coding_sequence 1
- 1 22
Is_annotated 1
- 1 · 22 ✖
| Sequence_accession_number ▼ | Species_name | GC_content | Sequence_length | Sequence_status | Is_protein_coding_sequence | Is_annotated |
|---|---|---|---|---|---|---|
| FB335888 | Branchiostoma floridae | 48.1981981981982 | 444.0 | observed | 1 | 1 |
| FB335892 | Branchiostoma floridae | 49.3333333333333 | 450.0 | observed | 1 | 1 |
| HC752920 | Branchiostoma floridae | 52.0480225988701 | 1416.0 | observed | 1 | 1 |
| HC752922 | Branchiostoma floridae | 56.078431372549 | 1530.0 | observed | 1 | 1 |
| HC752924 | Branchiostoma floridae | 55.1633986928105 | 1530.0 | observed | 1 | 1 |
| HC754149 | Branchiostoma floridae | 56.7852437417655 | 1518.0 | observed | 1 | 1 |
| HC754300 | Branchiostoma floridae | 57.8327444051826 | 849.0 | observed | 1 | 1 |
| HI183721 | Branchiostoma floridae | 53.9583333333333 | 480.0 | observed | 1 | 1 |
| HI183722 | Branchiostoma floridae | 53.0973451327434 | 678.0 | observed | 1 | 1 |
| HI183723 | Branchiostoma floridae | 59.4989561586639 | 479.0 | observed | 1 | 1 |
| HI183724 | Branchiostoma floridae | 59.6194503171247 | 473.0 | observed | 1 | 1 |
| HI183725 | Branchiostoma floridae | 55.8035714285714 | 672.0 | observed | 1 | 1 |
| HI183729 | Branchiostoma floridae | 56.3636363636364 | 660.0 | observed | 1 | 1 |
| HI183730 | Branchiostoma floridae | 53.6953242835596 | 663.0 | observed | 1 | 1 |
| HI183731 | Branchiostoma floridae | 56.3527653213752 | 669.0 | observed | 1 | 1 |
| HI183732 | Branchiostoma floridae | 56.2691131498471 | 654.0 | observed | 1 | 1 |
| HI183734 | Branchiostoma floridae | 61.4916286149163 | 657.0 | observed | 1 | 1 |
| HI183736 | Branchiostoma floridae | 60.4790419161677 | 668.0 | observed | 1 | 1 |
| HI183737 | Branchiostoma floridae | 55.9043348281016 | 669.0 | observed | 1 | 1 |
| HI183738 | Branchiostoma floridae | 56.6066066066066 | 666.0 | observed | 1 | 1 |
| HI183741 | Branchiostoma floridae | 57.4242424242424 | 660.0 | observed | 1 | 1 |
| HI183742 | Branchiostoma floridae | 56.0606060606061 | 660.0 | observed | 1 | 1 |
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CREATE TABLE Marine_Sequences (
Sequence_accession_number TEXT PRIMARY KEY,
Species_name TEXT,
GC_content TEXT,
Sequence_length TEXT,
Sequence_status TEXT,
Is_protein_coding_sequence INTEGER,
Is_annotated INTEGER,
FOREIGN KEY (Species_name) REFERENCES Marine_Species (Species_name),
FOREIGN KEY (Sequence_accession_number) REFERENCES Sequences (Sequence_accession_number)
);