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Marine_Species

Catalogs marine species associated with genetic sequences in the dataset. It includes the species name, taxonomic classification (domain, phylum), and information on whether the species is considered deep-sea.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Species_name
Name of the marine species (Primary Key). Searchable
Domain
Taxonomic domain of the species
Phylum
Taxonomic phylum of the species
Taxonomic_source
Source of the taxonomic classification
Is_deep_sea
Indicates if the species is a deep-sea species (1 for yes, 0 for no)
Deep_sea_source
Source of information on the species' deep-sea status
Is_ABNJ_present
Indicates if the species is present in ABNJ (YES, NO, UNKNOWN)

191 rows where Is_deep_sea = 0 and Phylum = "Proteobacteria"

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Suggested facets: Taxonomic_source, is_ABNJ_present

Is_ABNJ_present 3

  • UNKNOWN 108
  • YES 61
  • NO 22

Phylum 1

  • Proteobacteria · 191 ✖

Is_deep_sea 1

  • - · 191 ✖

Domain 1

  • Bacteria 191
Species_name ▼ Domain Phylum Taxonomic_source Is_deep_sea Deep_sea_source is_ABNJ_present
Aeromonas salmonicida Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Agarivorans albus Bacteria Proteobacteria WoRMS 0 0 YES
Alcanivorax borkumensis Bacteria Proteobacteria WoRMS 0 0 YES
Alcanivorax hongdengensis Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Alcanivorax jadensis Bacteria Proteobacteria WoRMS 0 0 YES
Aliivibrio fischeri Bacteria Proteobacteria WoRMS 0 0 YES
Aliivibrio logei Bacteria Proteobacteria WoRMS 0   UNKNOWN
Aliivibrio salmonicida Bacteria Proteobacteria WoRMS 0 0 YES
Aliivibrio wodanis Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Aurantimonas manganoxydans Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Bermanella marisrubri Bacteria Proteobacteria WoRMS 0 0 YES
Candidatus endobugula sertula Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Candidatus pelagibacter Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Candidatus pelagibacter ubique Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Colwellia chukchiensis Bacteria Proteobacteria WoRMS 0   UNKNOWN
Colwellia demingiae Bacteria Proteobacteria WoRMS 0   UNKNOWN
Colwellia psychrerythraea Bacteria Proteobacteria WoRMS 0 0 YES
Congregibacter litoralis Bacteria Proteobacteria WoRMS 0 0 NO
Desulfobacula phenolica Bacteria Proteobacteria WoRMS 0   UNKNOWN
Desulfobacula toluolica Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Desulfomicrobium baculatum Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Desulfomicrobium baculatum dsm 4028 Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Desulfospira joergensenii Bacteria Proteobacteria WoRMS 0 0 YES
Desulfotalea psychrophila Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Desulfotalea psychrophila lsv54 Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Dinoroseobacter shibae Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Erythrobacter litoralis Bacteria Proteobacteria WoRMS 0 0 YES
Erythrobacter longus Bacteria Proteobacteria WoRMS 0   YES
Ferrimonas balearica Bacteria Proteobacteria WoRMS 0 0 YES
Fulvimarina pelagi Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Glaciecola punicea Bacteria Proteobacteria WoRMS 0 0 NO
Hahella chejuensis Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Haliangium ochraceum Bacteria Proteobacteria WoRMS 0 0 YES
Halomonas aquamarina Bacteria Proteobacteria WoRMS 0 0 YES
Halomonas axialensis Bacteria Proteobacteria WoRMS 0   YES
Halomonas cupida Bacteria Proteobacteria WoRMS 0   YES
Hippea maritima Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Hoeflea phototrophica Bacteria Proteobacteria WoRMS 0 0 NO
Hydrogenovibrio marinus Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Hyphomonas adhaerens Bacteria Proteobacteria WoRMS 0   UNKNOWN
Hyphomonas neptunium Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Idiomarina zobellii Bacteria Proteobacteria WoRMS 0   YES
Jannaschia donghaensis Bacteria Proteobacteria WoRMS 0   UNKNOWN
Jannaschia rubra Bacteria Proteobacteria WoRMS 0   UNKNOWN
Kangiella koreensis Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Magnetococcus marinus Bacteria Proteobacteria WoRMS 0   UNKNOWN
Maricaulis maris Bacteria Proteobacteria WoRMS 0 0 YES
Marinobacter algicola Bacteria Proteobacteria WoRMS 0 0 YES
Marinobacter pelagius Bacteria Proteobacteria WoRMS 0   UNKNOWN
Marinobacter psychrophilus Bacteria Proteobacteria WoRMS 0   NO
Marinobacter zhejiangensis Bacteria Proteobacteria WoRMS 0   UNKNOWN
Marinomonas aquimarina Bacteria Proteobacteria WoRMS 0   UNKNOWN
Marinomonas mediterranea Bacteria Proteobacteria WoRMS 0 0 YES
Marinomonas primoryensis Bacteria Proteobacteria WoRMS 0   UNKNOWN
Marinomonas ushuaiensis Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Methylophaga aminisulfidivorans Bacteria Proteobacteria WoRMS 0 0 YES
Moritella japonica Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Moritella marina Bacteria Proteobacteria WoRMS 0 0 YES
Moritella viscosa Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Neptuniibacter caesariensis Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Nitratireductor aquibiodomus Bacteria Proteobacteria WoRMS 0   YES
Nitrococcus mobilis Bacteria Proteobacteria WoRMS 0 0 YES
Nitrococcus mobilis nb-231 Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Nitrosococcus oceani Bacteria Proteobacteria WoRMS 0 0 YES
Oceanicaulis alexandrii Bacteria Proteobacteria WoRMS 0 0 YES
Oceanicola granulosus Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Oceanospirillum multiglobuliferum Bacteria Proteobacteria WoRMS 0   YES
Octadecabacter antarcticus Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Octadecabacter antarcticus 307 Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Paracoccus haeundaensis Bacteria Proteobacteria WoRMS 0   UNKNOWN
Paracoccus zeaxanthinifaciens Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Parvibaculum lavamentivorans Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Parvularcula bermudensis Bacteria Proteobacteria WoRMS 0 0 NO
Photobacterium angustum Bacteria Proteobacteria WoRMS 0 0 YES
Photobacterium aquimaris Bacteria Proteobacteria WoRMS 0   UNKNOWN
Photobacterium frigidiphilum Bacteria Proteobacteria WoRMS 0   UNKNOWN
Photobacterium ganghwense Bacteria Proteobacteria WoRMS 0   UNKNOWN
Photobacterium indicum Bacteria Proteobacteria WoRMS 0   UNKNOWN
Photobacterium kishitanii Bacteria Proteobacteria WoRMS 0   UNKNOWN
Photobacterium leiognathi Bacteria Proteobacteria WoRMS 0 0 YES
Photobacterium lipolyticum Bacteria Proteobacteria WoRMS 0   UNKNOWN
Piscirickettsia salmonis Bacteria Proteobacteria WoRMS 0 0 YES
Plesiocystis pacifica Bacteria Proteobacteria WoRMS 0 0 YES
Pseudoalteromonas atlantica Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Pseudoalteromonas carrageenovora Bacteria Proteobacteria WoRMS 0 0 NO
Pseudoalteromonas citrea Bacteria Proteobacteria WoRMS 0   YES
Pseudoalteromonas flavipulchra Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Pseudoalteromonas haloplanktis Bacteria Proteobacteria WoRMS 0 0 YES
Pseudoalteromonas luteoviolacea Bacteria Proteobacteria WoRMS 0 0 YES
Pseudoalteromonas maricaloris Bacteria Proteobacteria WoRMS 0   NO
Pseudoalteromonas marina Bacteria Proteobacteria WoRMS 0 0 YES
Pseudoalteromonas nigrifaciens Bacteria Proteobacteria WoRMS 0   UNKNOWN
Pseudoalteromonas phenolica Bacteria Proteobacteria WoRMS 0   YES
Pseudoalteromonas piscicida Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Pseudoalteromonas tetraodonis Bacteria Proteobacteria WoRMS 0   UNKNOWN
Pseudoalteromonas translucida Bacteria Proteobacteria WoRMS 0   NO
Pseudoalteromonas tunicata Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Pseudovibrio denitrificans Bacteria Proteobacteria WoRMS 0   UNKNOWN
Pseudovibrio sp. fo-beg1 Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Psychrobacter maritimus Bacteria Proteobacteria WoRMS 0   UNKNOWN

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CREATE TABLE Marine_Species (
        Species_name TEXT PRIMARY KEY,
        Domain TEXT,
        Phylum TEXT,
        Taxonomic_source TEXT,
        Is_deep_sea INTEGER,
        Deep_sea_source TEXT,
        is_ABNJ_present TEXT
    );
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