home / MABPAT_dataset

Marine_Species

Catalogs marine species associated with genetic sequences in the dataset. It includes the species name, taxonomic classification (domain, phylum), and information on whether the species is considered deep-sea.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Species_name
Name of the marine species (Primary Key). Searchable
Domain
Taxonomic domain of the species
Phylum
Taxonomic phylum of the species
Taxonomic_source
Source of the taxonomic classification
Is_deep_sea
Indicates if the species is a deep-sea species (1 for yes, 0 for no)
Deep_sea_source
Source of information on the species' deep-sea status
Is_ABNJ_present
Indicates if the species is present in ABNJ (YES, NO, UNKNOWN)

209 rows where Phylum = "Pseudomonadota" and Taxonomic_source = "Wikipedia"

✎ View and edit SQL

This data as json, CSV (advanced)

Suggested facets: Deep_sea_source

Is_deep_sea 2

  • 0 172
  • 1 37

Phylum 1

  • Pseudomonadota · 209 ✖

Is_ABNJ_present 1

  • UNKNOWN 209

Domain 1

  • Bacteria 209
Species_name ▼ Domain Phylum Taxonomic_source Is_deep_sea Deep_sea_source is_ABNJ_present
Aeromonas molluscorum 848 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Aeromonas salmonicida subsp. salmonicida Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Aeromonas salmonicida subsp. salmonicida a449 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Alcanivorax Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1099/ijs.0.049957-0 UNKNOWN
Alcanivorax borkumensis sk2 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Alcanivorax nanhaiticus Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax pacificus Bacteria Pseudomonadota Wikipedia 1 2018 UNKNOWN
Alcanivorax sp Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. dg881 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. k Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. k2-1 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. k3-3 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. nbrc 101096 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. nbrc 102022 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. nbrc 102027 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. st-ta Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. vbw004 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. z Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Aliivibrio fischeri es114 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Aliivibrio salmonicida lfi1238 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Alteromonas aestuariivivens Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alteromonas australica Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alteromonas macleodii atcc 27126 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Alteromonas mediterranea Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alteromonas mediterranea de Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1007/s10482-014-0309-y UNKNOWN
Alteromonas sp. Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1007/s00203-022-02908-8 UNKNOWN
Alteromonas sp. gnum-1 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Alteromonas sp. tmed35 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Aurantimonas Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1080/01490450902724840 UNKNOWN
Aurantimonas manganoxydans si85-9a1 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Colwellia psychrerythraea 34h Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Congregibacter litoralis kt71 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Dinoroseobacter shibae dfl 12 = dsm 16493 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Ectothiorhodospira Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Erythrobacter litoralis htcc2594 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Erythrobacter sp. Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1099/ijsem.0.003136 UNKNOWN
Erythrobacter sp. nap1 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Erythrobacter sp. sd-21 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Gamma proteobacterium 'hot 75m4' Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Gamma proteobacterium htcc2207 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Gammaproteobacteria Bacteria Pseudomonadota Wikipedia 1 2018 UNKNOWN
Gammaproteobacteria bacterium Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Hahella chejuensis kctc 2396 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Halomonas titanicae Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1099/ijs.0.020628-0 UNKNOWN
Hydrogenovibrio crunogenus Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1128/jb.187.16.5761-5766.2005 UNKNOWN
Hyphomonas neptunium atcc 15444 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Idiomarina loihiensis l2tr Bacteria Pseudomonadota Wikipedia 1 2018 UNKNOWN
Idiomarina sp Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Idiomarina sp. Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Idiomarina sp. h2 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Idiomarina sp. md25a Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Jannaschia Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Jannaschia sp. Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Jannaschia sp. ccs1 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Leptothrix sp. (in: bacteria) Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Magnetococcus Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Magnetococcus marinus mc-1 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Marine gamma proteobacterium htcc2080 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Marine gamma proteobacterium htcc2143 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Marinobacter adhaerens Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Marinobacter adhaerens hp15 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Marinobacter sp. Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Marinobacter sp. elb17 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Marinomonas Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1007/s10482-014-0213-5 UNKNOWN
Marinomonas sp. med121 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Marinomonas sp. mwyl1 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Mariprofundus ferrooxydans pv-1 Bacteria Pseudomonadota Wikipedia 1 https://img.jgi.doe.gov/cgi-bin/m/main.cgi?section=TaxonDetail&page=taxonDetail&taxon_oid=639857004 UNKNOWN
Maritimibacter alkaliphilus htcc2654 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Methylophaga Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Microbulbifer elongatus Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Moritella marina atcc 15381 Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1128/JB.01382-12 UNKNOWN
Nitrosococcus oceani atcc 19707 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Nitrosococcus watsonii Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Novosphingobium aromaticivorans Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Novosphingobium aromaticivorans dsm 12444 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Oceanicaulis sp Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Oceanicaulis sp. htcc2633 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Oceanicola granulosus htcc2516 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Oceanobacter Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Oceanobacter sp Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Oceanospirillum Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Parvibaculum lavamentivorans ds-1 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Photobacterium damselae Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Photobacterium damselae subsp. piscicida Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Photobacterium phosphoreum Bacteria Pseudomonadota Wikipedia 1 https://doi.org/10.1128/genomeA.00096-14 UNKNOWN
Photobacterium profundum 3tck Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Photobacterium profundum ss9 Bacteria Pseudomonadota Wikipedia 1 2018 UNKNOWN
Photobacterium sp. Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Photobacterium sp. ska34 Bacteria Pseudomonadota Wikipedia 1 2018 UNKNOWN
Pseudoalteromonas agarivorans dsm 14585 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Pseudoalteromonas agarivorans s816 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Pseudoalteromonas arctica Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Pseudoalteromonas arctica a 37-1-2 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Pseudoalteromonas atlantica t6c Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Pseudoalteromonas caenipelagi Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Pseudoalteromonas denitrificans dsm 6059 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Pseudoalteromonas distincta Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Pseudoalteromonas lipolytica Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Pseudoalteromonas marina dsm 17587 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Pseudoalteromonas neustonica Bacteria Pseudomonadota Wikipedia 0   UNKNOWN

Next page

Advanced export

JSON shape: default, array, newline-delimited, object

CSV options:

CREATE TABLE Marine_Species (
        Species_name TEXT PRIMARY KEY,
        Domain TEXT,
        Phylum TEXT,
        Taxonomic_source TEXT,
        Is_deep_sea INTEGER,
        Deep_sea_source TEXT,
        is_ABNJ_present TEXT
    );
Powered by Datasette · Queries took 716.706ms · Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT