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Marine_Species

Catalogs marine species associated with genetic sequences in the dataset. It includes the species name, taxonomic classification (domain, phylum), and information on whether the species is considered deep-sea.

Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT

Species_name
Name of the marine species (Primary Key). Searchable
Domain
Taxonomic domain of the species
Phylum
Taxonomic phylum of the species
Taxonomic_source
Source of the taxonomic classification
Is_deep_sea
Indicates if the species is a deep-sea species (1 for yes, 0 for no)
Deep_sea_source
Source of information on the species' deep-sea status
Is_ABNJ_present
Indicates if the species is present in ABNJ (YES, NO, UNKNOWN)

802 rows where Domain = "Bacteria" and Is_deep_sea = 0

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Suggested facets: Taxonomic_source, is_ABNJ_present

Phylum 30

  • Pseudomonadota 324
  • Proteobacteria 191
  • Bacteroidota 68
  • Cyanobacteria 66
  • Bacteroidetes 38
  • Cyanobacteriota 38
  • Bacillota 13
  • Actinobacteria 7
  • Campylobacterota 6
  • Firmicutes 6
  • Plancomycetota 6
  • Chlorobi 5
  • Thermotogota 5
  • Chlorobiota 4
  • Planctomycetota 4
  • Actinomycetota 3
  • Thermotogae 3
  • Deinococcus-Thermus 2
  • Planctomycetes 2
  • Actynomycetota 1
  • Aquificota 1
  • Calditrichota 1
  • Deferribacteres 1
  • Deferribacterota 1
  • Lentisphaerae 1
  • Lentisphaerota 1
  • Myxococcota 1
  • Synergistetes 1
  • Synergistota 1
  • Thermodesulfobacteriota 1

Is_ABNJ_present 3

  • UNKNOWN 691
  • YES 81
  • NO 30

Is_deep_sea 1

  • - · 802 ✖

Domain 1

  • Bacteria · 802 ✖
Species_name ▼ Domain Phylum Taxonomic_source Is_deep_sea Deep_sea_source is_ABNJ_present
Acaryochloris Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Acaryochloris marina Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Acaryochloris marina mbic11017 Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Aequorivita antarctica Bacteria Bacteroidetes WoRMS 0   UNKNOWN
Aeromicrobium marinum dsm 15272 Bacteria Actynomycetota NCBI 0   UNKNOWN
Aeromonas molluscorum 848 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Aeromonas salmonicida Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Aeromonas salmonicida subsp. salmonicida Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Aeromonas salmonicida subsp. salmonicida a449 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Agarivorans albus Bacteria Proteobacteria WoRMS 0 0 YES
Alcanivorax borkumensis Bacteria Proteobacteria WoRMS 0 0 YES
Alcanivorax borkumensis sk2 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Alcanivorax hongdengensis Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Alcanivorax jadensis Bacteria Proteobacteria WoRMS 0 0 YES
Alcanivorax nanhaiticus Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. dg881 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. k Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. k2-1 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. k3-3 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. nbrc 101096 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. nbrc 102022 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. nbrc 102027 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. st-ta Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. vbw004 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alcanivorax sp. z Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Algibacter aquaticus Bacteria Bacteroidota NCBI 0   UNKNOWN
Algibacter lectus Bacteria Bacteroidetes WoRMS 0 0 NO
Algibacter marinivivus Bacteria Bacteroidota NCBI 0   UNKNOWN
Aliivibrio fischeri Bacteria Proteobacteria WoRMS 0 0 YES
Aliivibrio fischeri es114 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Aliivibrio logei Bacteria Proteobacteria WoRMS 0   UNKNOWN
Aliivibrio salmonicida Bacteria Proteobacteria WoRMS 0 0 YES
Aliivibrio salmonicida lfi1238 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Aliivibrio wodanis Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Alteromonas aestuariivivens Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alteromonas australica Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alteromonas macleodii atcc 27126 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Alteromonas mediterranea Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Alteromonas sp. gnum-1 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Alteromonas sp. tmed35 Bacteria Pseudomonadota Wikipedia 0   UNKNOWN
Anabaena cylindrica Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Anabaena cylindrica pcc 7122 Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Anabaena laxa Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Anabaena sp Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Anabaena sp. al09 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Anabaena sp. ch1 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Anabaena sp. pcc 7108 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Anabaena sp. ybs01 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Aquifex aeolicus Bacteria Aquificota Wikipedia 0   UNKNOWN
Aquimarina macrocephali Bacteria Bacteroidetes WoRMS 0 0 UNKNOWN
Arenibacter echinorum Bacteria Bacteroidetes WoRMS 0   UNKNOWN
Arenimonas sp Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Arthrospira platensis Bacteria Cyanobacteria Wikipedia 0 0 NO
Arthrospira platensis c1 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Arthrospira platensis fachb-341 Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Arthrospira platensis kmmcc cy-007 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Arthrospira platensis nies-39 Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Arthrospira sp. srm16 Bacteria Cyanobacteriota Wikipedia 0   UNKNOWN
Aurantimonas manganoxydans Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Aurantimonas manganoxydans si85-9a1 Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Aureispira marina Bacteria Bacteroidetes WoRMS 0 0 UNKNOWN
Bacillus altitudinis Bacteria Bacillota NCBI 0   UNKNOWN
Bacillus tropicus Bacteria Bacillota NCBI 0   UNKNOWN
Bacillus xiamenensis Bacteria Bacillota NCBI 0   UNKNOWN
Belliella Bacteria Bacteroidota Wikipedia 0 0 UNKNOWN
Belliella baltica Bacteria Bacteroidetes WoRMS 0   UNKNOWN
Bermanella marisrubri Bacteria Proteobacteria WoRMS 0 0 YES
Bizionia algoritergicola Bacteria Bacteroidetes WoRMS 0   UNKNOWN
Bizionia paragorgiae Bacteria Bacteroidetes WoRMS 0   NO
Bizionia saleffrena Bacteria Bacteroidetes WoRMS 0   NO
Blastopirellula marina Bacteria Planctomycetes WoRMS 0 0 YES
Blastopirellula marina dsm 3645 Bacteria Planctomycetota Wikipedia 0 0 UNKNOWN
Caldithrix sp Bacteria Calditrichota NCBI 0   UNKNOWN
Calothrix sp. Bacteria Cyanobacteria Wikipedia 0 0 UNKNOWN
Candidatus endobugula sertula Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Candidatus pelagibacter Bacteria Proteobacteria WoRMS 0 0 UNKNOWN
Candidatus pelagibacter ubique Bacteria Proteobacteria NCBI 0 0 UNKNOWN
Candidatus sulfurimonas baltica Bacteria Campylobacterota NCBI 0   UNKNOWN
Candidatus sulfurimonas marisnigri Bacteria Campylobacterota NCBI 0   UNKNOWN
Cellulophaga Bacteria Bacteroidota Wikipedia 0 0 UNKNOWN
Cellulophaga baltica Bacteria Bacteroidetes WoRMS 0   UNKNOWN
Cellulophaga lytica Bacteria Bacteroidetes WoRMS 0 0 YES
Cellulophaga omnivescoria Bacteria Bacteroidota NCBI 0   UNKNOWN
Chimaera sp. Bacteria Actinomycetota Wikipedia 0 0 UNKNOWN
Chlorobium phaeobacteroides Bacteria Chlorobiota Wikipedia 0 0 UNKNOWN
Chlorobium phaeobacteroides bs1 Bacteria Chlorobiota Wikipedia 0 0 UNKNOWN
Chlorobium phaeovibrioides Bacteria Chlorobi WoRMS 0   UNKNOWN
Chloroherpeton thalassium Bacteria Chlorobi WoRMS 0 0 YES
Chloroherpeton thalassium atcc 35110 Bacteria Chlorobi NCBI 0 0 UNKNOWN
Chryseobacterium aquaticum subsp. greenlandense Bacteria Bacteroidota NCBI 0   UNKNOWN
Coccolithus braarudii Bacteria Pseudomonadota NCBI 0   UNKNOWN
Coleofasciculus chthonoplastes Bacteria Cyanobacteria NCBI 0 0 NO
Coleofasciculus chthonoplastes pcc 7420 Bacteria Cyanobacteria NCBI 0 0 UNKNOWN
Colwellia chukchiensis Bacteria Proteobacteria WoRMS 0   UNKNOWN
Colwellia demingiae Bacteria Proteobacteria WoRMS 0   UNKNOWN
Colwellia maris Bacteria Pseudomonadota NCBI 0   UNKNOWN
Colwellia psychrerythraea Bacteria Proteobacteria WoRMS 0 0 YES
Colwellia psychrerythraea 34h Bacteria Pseudomonadota Wikipedia 0 0 UNKNOWN
Congregibacter litoralis Bacteria Proteobacteria WoRMS 0 0 NO

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CREATE TABLE Marine_Species (
        Species_name TEXT PRIMARY KEY,
        Domain TEXT,
        Phylum TEXT,
        Taxonomic_source TEXT,
        Is_deep_sea INTEGER,
        Deep_sea_source TEXT,
        is_ABNJ_present TEXT
    );
Powered by Datasette · Queries took 18.584ms · Data license: CC BY 4.0 · Data source: Novel dataset reveals growing prominence of deep-sea life for marine bioprospecting · About: About MABPAT